RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MICALCLQ6ZW33 695 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 OTOAQ7RTW8 1153 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 SLC22A15Q8IZD6 547 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 LCN9Q8WX39 176 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 UBXN4Q92575 508 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 LPGAT1Q92604 370 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 TGM7Q96PF1 710 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 DPH1Q9BZG8 443 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 RAB17Q9H0T7 212 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.74■□□□□ 0.11
CD28-203ENST00000458610 KLHL3Q9UH77 587 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 COMMD10Q9Y6G5 202 aa15.74■□□□□ 0.11
CD28-203ENST00000458610 A0A087WV48 116 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 OR5K3A6NET4 321 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 E5RI56 91 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 GPC4O75487 556 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 RASSF9O75901 435 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 SLCO2B1O94956 709 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 HGFP14210 728 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 PKMP14618 531 aaKnown RBP15.73■□□□□ 0.11
CD28-203ENST00000458610 CHRM3P20309 590 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 AOAHP28039 575 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 ACADLP28330 430 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 SLC5A2P31639 672 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 WHAMMP3Q1A5X7 153 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 PLEKHS1Q5SXH7 462 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 CACHD1Q5VU97 1274 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 ZNF470Q6ECI4 717 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 DUS1LQ6P1R4 473 aaKnown RBP15.73■□□□□ 0.11
CD28-203ENST00000458610 CENPUQ71F23 418 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 ZNF572Q7Z3I7 529 aaPredicted RBP15.73■□□□□ 0.11
CD28-203ENST00000458610 PRSS42Q7Z5A4 293 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 FAM129CQ86XR2 697 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 CARFQ8N187 725 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 PHC3Q8NDX5 983 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 OR4E2Q8NGC2 313 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 ZNF592Q92610 1267 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 RSC1A1Q92681 617 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 USP7Q93009 1102 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 FOPNLQ96NB1 174 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 DCBLD2Q96PD2 775 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 TEFMQ96QE5 360 aaKnown RBP15.73■□□□□ 0.11
CD28-203ENST00000458610 ZPBPQ9BS86 351 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 DDA1Q9BW61 102 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 FBXO8Q9NRD0 319 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 SLC39A1Q9NY26 324 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 WHRNQ9P202 907 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 ZC3H7BQ9UGR2 993 aaKnown RBP15.73■□□□□ 0.11
CD28-203ENST00000458610 CRYL1Q9Y2S2 319 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 SNX24Q9Y343 169 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 PCDHB11Q9Y5F2 797 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 PCDHGA3Q9Y5H0 932 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 CHD8Q9HCK8 2581 aa15.73■□□□□ 0.11
CD28-203ENST00000458610 OR6C74A6NCV1 312 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 EFCAB7A8K855 629 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 IQCF5A8MTL0 148 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 BHMG1C9JSJ3 638 aaPredicted RBP15.72■□□□□ 0.11
CD28-203ENST00000458610 MAP3K7O43318 606 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 TLX3O43711 291 aaPredicted RBP15.72■□□□□ 0.11
CD28-203ENST00000458610 S1PR4O95977 384 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 FGF3P11487 239 aaPredicted RBP15.72■□□□□ 0.11
CD28-203ENST00000458610 CCL4P13236 92 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 ARL4DP49703 201 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 MC2RQ01718 297 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 CAV1Q03135 178 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 C2orf54Q08AI8 447 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 CRYMQ14894 314 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 TTLL9Q3SXZ7 439 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 DNTTIP2Q5QJE6 756 aaKnown RBP15.72■□□□□ 0.11
CD28-203ENST00000458610 DCAF12Q5T6F0 453 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 BROXQ5VW32 411 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 UNC5DQ6UXZ4 953 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 KCNMB4Q86W47 210 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 AMIGO1Q86WK6 493 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 KMT5CQ86Y97 462 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 KRT222Q8N1A0 295 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 MNS1Q8NEH6 495 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 OR5K2Q8NHB8 316 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 KCNE4Q8WWG9 221 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 BIRC8Q96P09 236 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 ZNF768Q9H5H4 540 aaKnown RBP15.72■□□□□ 0.11
CD28-203ENST00000458610 LATS2Q9NRM7 1088 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 FBXO5Q9UKT4 447 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 ACSL6Q9UKU0 697 aa15.72■□□□□ 0.11
CD28-203ENST00000458610 AGRPO00253 132 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 ITIH1P19827 911 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 SHMT2P34897 504 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 ELK3P41970 407 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 RPL21P46778 160 aaKnown RBP15.71■□□□□ 0.11
CD28-203ENST00000458610 LEPRP48357 1165 aaKnown RBP15.71■□□□□ 0.11
CD28-203ENST00000458610 CSE1LP55060 971 aaKnown RBP15.71■□□□□ 0.11
CD28-203ENST00000458610 GFERP55789 205 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 PRKG2Q13237 762 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 CTBP1Q13363 440 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 HSP90AA5PQ58FG0 334 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 CEACAM20Q6UY09 585 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 FAM92BQ6ZTR7 304 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 KIAA0408Q6ZU52 694 aa15.71■□□□□ 0.11
CD28-203ENST00000458610 AGGF1Q8N302 714 aaeCLIP15.71■□□□□ 0.11
CD28-203ENST00000458610 OR52E1Q8NGJ3 308 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms