RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ZCCHC14Q8WYQ9 949 aaKnown RBP9.82□□□□□ -0.84
ATG4A-206ENST00000457035 SH3KBP1Q96B97 665 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 PANX3Q96QZ0 392 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 SLC38A3Q99624 504 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 MCMBPQ9BTE3 642 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 TSPYL1Q9H0U9 437 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 ABCG4Q9H172 646 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 LRRN3Q9H3W5 708 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 PPANQ9NQ55 473 aaKnown RBP9.82□□□□□ -0.84
ATG4A-206ENST00000457035 SMYD2Q9NRG4 433 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 POT1Q9NUX5 634 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 SLC17A6Q9P2U8 582 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 KLK13Q9UKR3 277 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 PSAT1Q9Y617 370 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 CFAP20Q9Y6A4 193 aaKnown RBP9.82□□□□□ -0.84
ATG4A-206ENST00000457035 AHCTF1Q8WYP5 2266 aa9.82□□□□□ -0.84
ATG4A-206ENST00000457035 IGHV1OR21-1A0A087WYE8 117 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 TCRBV9S1A1TA0A576 114 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 CXorf49A8MYA2 514 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 KPNA5O15131 536 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 PIAS1O75925 651 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 MT-CO3P00414 261 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 RPLP0P05388 317 aaKnown RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 MTHFD1P11586 935 aaKnown RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 CHRM3P20309 590 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 CD1CP29017 333 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 CLCN7P51798 805 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 CSE1LP55060 971 aaKnown RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 CFHR1Q03591 330 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 HSPA14Q0VDF9 509 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 BOP1Q14137 746 aaKnown RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 GBX1Q14549 363 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 KYNUQ16719 465 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 PLEKHS1Q5SXH7 462 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 CAPN12Q6ZSI9 719 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 USP53Q70EK8 1073 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 TMPRSS9Q7Z410 1059 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 PDZD3Q86UT5 571 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 RBM12BQ8IXT5 1001 aaKnown RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 SLC22A15Q8IZD6 547 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 DCBLD1Q8N8Z6 715 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 KDF1Q8NAX2 398 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 PHC3Q8NDX5 983 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 WDR48Q8TAF3 677 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 TFGQ92734 400 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 GATA6Q92908 595 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 TMEM159Q96B96 161 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 CXorf40BQ96DE9 158 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 C12orf66Q96MD2 445 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 FMO2Q99518 471 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 SLC30A3Q99726 388 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 AARSD1Q9BTE6 412 aaKnown RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 TSSK1BQ9BXA7 367 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 TBC1D10AQ9BXI6 508 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 KLHL42Q9P2K6 505 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 MTRF1LQ9UGC7 380 aaKnown RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 NFU1Q9UMS0 254 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 COMMD10Q9Y6G5 202 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 URB1O60287 2271 aaKnown RBP9.81□□□□□ -0.84
ATG4A-206ENST00000457035 ZFHX4Q86UP3 3567 aa9.81□□□□□ -0.84
ATG4A-206ENST00000457035 ASPMQ8IZT6 3477 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 LILRA5A6NI73 299 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 FAM159BA6NKW6 160 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 IFRD1O00458 451 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 ZW10O43264 779 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 TCEA3O75764 348 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 APOA4P06727 396 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 SLC35G4P0C7Q5 338 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 JUPP14923 745 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 CD9P21926 228 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 EPHA4P54764 986 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 GPLD1P80108 840 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 BIRC2Q13490 618 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 GPR18Q14330 331 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 AMZ1Q400G9 498 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 TEX35Q5T0J7 233 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 UBAP2Q5T6F2 1119 aaKnown RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 HES3Q5TGS1 186 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 NKAIN2Q5VXU1 208 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 DUS1LQ6P1R4 473 aaKnown RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 ZNF574Q6ZN55 896 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 CEP128Q6ZU80 1094 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 OTOAQ7RTW8 1153 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 SLC26A11Q86WA9 606 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 ZC3HC1Q86WB0 502 aaKnown RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 MARCH9Q86YJ5 346 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 TRIM48Q8IWZ4 208 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 GALNT15Q8N3T1 639 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 KCNJ9Q92806 393 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 FAM136AQ96C01 138 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 FERD3LQ96RJ6 166 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 GFM1Q96RP9 751 aaKnown RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 CCDC68Q9H2F9 335 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 STN1Q9H668 368 aaKnown RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 IMP3Q9NV31 184 aaKnown RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 KCNK4Q9NYG8 393 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 NINJ2Q9NZG7 142 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 OGFRQ9NZT2 677 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 ZFATQ9P243 1243 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms