RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ADARP55265 1226 aaKnown RBP16.89■□□□□ 0.29
USP39-208ENST00000455732 RAB15P59190 212 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 VAC14Q08AM6 782 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 BOP1Q14137 746 aaKnown RBP16.89■□□□□ 0.29
USP39-208ENST00000455732 SYTL3Q4VX76 610 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 SNAP47Q5SQN1 464 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 TMEM164Q5U3C3 297 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 SDCCAG8Q86SQ7 713 aaPredicted RBP16.89■□□□□ 0.29
USP39-208ENST00000455732 ZFAND4Q86XD8 727 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 ACVR1CQ8NER5 493 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 ART4Q93070 314 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 ZNF669Q96BR6 464 aaPredicted RBP16.89■□□□□ 0.29
USP39-208ENST00000455732 ZDHHC12Q96GR4 267 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 TGM7Q96PF1 710 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 DDA1Q9BW61 102 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 SEMA5BQ9P283 1151 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 RPS6KL1Q9Y6S9 549 aa16.89■□□□□ 0.29
USP39-208ENST00000455732 OR5K3A6NET4 321 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 K7ENP7 123 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 PFDN6O15212 129 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 NDUFS3O75489 264 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 ACADLP28330 430 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 LEPRP48357 1165 aaKnown RBP16.88■□□□□ 0.29
USP39-208ENST00000455732 MORF4L2Q15014 288 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 DNAJC21Q5F1R6 531 aaKnown RBP16.88■□□□□ 0.29
USP39-208ENST00000455732 ARHGAP40Q5TG30 622 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 IZUMO3Q5VZ72 239 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 NEPROQ6NW34 567 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 INO80CQ6PI98 192 aaPredicted RBP16.88■□□□□ 0.29
USP39-208ENST00000455732 CILP2Q8IUL8 1156 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 OTUD6BQ8N6M0 293 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 LKAAEAR1Q8TD35 194 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 LPGAT1Q92604 370 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 TFGQ92734 400 aaPredicted RBP16.88■□□□□ 0.29
USP39-208ENST00000455732 PANX3Q96QZ0 392 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 CCNL2Q96S94 520 aaPredicted RBP16.88■□□□□ 0.29
USP39-208ENST00000455732 CD180Q99467 661 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 TRIM56Q9BRZ2 755 aaKnown RBP16.88■□□□□ 0.29
USP39-208ENST00000455732 ZNF768Q9H5H4 540 aaKnown RBP16.88■□□□□ 0.29
USP39-208ENST00000455732 SIDT1Q9NXL6 827 aaKnown RBP16.88■□□□□ 0.29
USP39-208ENST00000455732 KLHL3Q9UH77 587 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 VPS9D1Q9Y2B5 631 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 B3GALT1Q9Y5Z6 326 aa16.88■□□□□ 0.29
USP39-208ENST00000455732 GCN1Q92616 2671 aaKnown RBP16.87■□□□□ 0.29
USP39-208ENST00000455732 EFCAB7A8K855 629 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 BHMG1C9JSJ3 638 aaPredicted RBP16.87■□□□□ 0.29
USP39-208ENST00000455732 GOLGA8KD6RF30 607 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 GOLGA8TH3BQL2 631 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 TTI1O43156 1089 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 GPC4O75487 556 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 CCR7P32248 378 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 MC2RQ01718 297 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 SRSF6Q13247 344 aaKnown RBP16.87■□□□□ 0.29
USP39-208ENST00000455732 KRT33BQ14525 404 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 PTRHD1Q6GMV3 140 aaKnown RBP16.87■□□□□ 0.29
USP39-208ENST00000455732 IRGCQ6NXR0 463 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 SYT10Q6XYQ8 523 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 OOSP2Q86WS3 158 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 FAM129CQ86XR2 697 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 LMNTD2Q8IXW0 634 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 SLC22A15Q8IZD6 547 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 ASZ1Q8WWH4 475 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 JPH3Q8WXH2 748 aaPredicted RBP16.87■□□□□ 0.29
USP39-208ENST00000455732 KLHL6Q8WZ60 621 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 STAMBPL1Q96FJ0 436 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 BIRC8Q96P09 236 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 FERD3LQ96RJ6 166 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 TFB2MQ9H5Q4 396 aaKnown RBP16.87■□□□□ 0.29
USP39-208ENST00000455732 FBXO8Q9NRD0 319 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 INTS10Q9NVR2 710 aaKnown RBP16.87■□□□□ 0.29
USP39-208ENST00000455732 SLC39A1Q9NY26 324 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 CDYLQ9Y232 598 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 MAD1L1Q9Y6D9 718 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 PIEZO2Q9H5I5 2752 aa16.87■□□□□ 0.29
USP39-208ENST00000455732 IQCF5A8MTL0 148 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 H3BMM5 538 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 MATN2O00339 956 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 SLCO2B1O94956 709 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 SEC31AO94979 1220 aaKnown RBP16.86■□□□□ 0.29
USP39-208ENST00000455732 TTC4O95801 387 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 ESR1P03372 595 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 PGAM1P18669 254 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 AOAHP28039 575 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 PPP1CAP62136 330 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 TMED2Q15363 201 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 CTSL3PQ5NE16 218 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 HIBCHQ6NVY1 386 aaPredicted RBP16.86■□□□□ 0.29
USP39-208ENST00000455732 PCSK4Q6UW60 755 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 CCDC81Q6ZN84 652 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 CENPUQ71F23 418 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 TBC1D21Q8IYX1 336 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 CARFQ8N187 725 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 SPATA4Q8NEY3 305 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 UBXN4Q92575 508 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 TEFMQ96QE5 360 aaKnown RBP16.86■□□□□ 0.29
USP39-208ENST00000455732 KRT12Q99456 494 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 TRIM51Q9BSJ1 452 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 NAT9Q9BTE0 207 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 ASPSCR1Q9BZE9 553 aa16.86■□□□□ 0.29
USP39-208ENST00000455732 HRASLS2Q9NWW9 162 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms