RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 RGS7P49802 495 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 CTSCP53634 463 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 UCP2P55851 309 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 COG7P83436 770 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 EGR4Q05215 589 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 PRKAA1Q13131 559 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 TRA2AQ13595 282 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 GPR18Q14330 331 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 TCTE1Q5JU00 501 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 GCNT6Q5T4J0 391 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 STRIP1Q5VSL9 837 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 SUSD4Q5VX71 490 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 MFSD12Q6NUT3 480 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 YTHDF3Q7Z739 585 aaKnown RBP4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 MRGPRGQ86SM5 289 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 PALB2Q86YC2 1186 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 DZIP1Q86YF9 867 aaKnown RBP4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 BMPERQ8N8U9 685 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 TRIML1Q8N9V2 468 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 C7orf57Q8NEG2 295 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 SGF29Q96ES7 293 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 SFXN2Q96NB2 322 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 RUNDC3BQ96NL0 473 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 CSF3RQ99062 836 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 SPXQ9BT56 116 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 PRSS22Q9GZN4 317 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 ABCG4Q9H172 646 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 HSD3B7Q9H2F3 369 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 EBF3Q9H4W6 596 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 PLAC1Q9HBJ0 212 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 DPP3Q9NY33 737 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 LRWD1Q9UFC0 647 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 MTF2Q9Y483 593 aaPredicted RBP4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 LOXL2Q9Y4K0 774 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 NME7Q9Y5B8 376 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 DMRT1Q9Y5R6 373 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 HS3ST3A1Q9Y663 406 aa4.03□□□□□ -1.76
HMGN3P1-201ENST00000453847 ATXN2Q99700 1313 aaKnown RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 TEX13DA0A0J9YY54 714 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 hDV102S1A0JD36 115 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CCDC69A6NI79 296 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 DUXAA6NLW8 204 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 PPIP5K2O43314 1243 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 RAMP2O60895 175 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 STAM2O75886 525 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 LETM1O95202 739 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 GH1P01241 217 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SP100P23497 879 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 MAPK3P27361 379 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CERS1P27544 350 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CCND3P30281 292 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SSTR2P30874 369 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 PTGER4P35408 488 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SOAT1P35610 550 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 RPL3P39023 403 aaKnown RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 NT5C2P49902 561 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 MFAP3P55082 362 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CASP9P55211 416 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CLDN15P56746 228 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 DLK1P80370 383 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 ABATP80404 500 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SRSF1Q07955 248 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SLC10A2Q12908 348 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CTF1Q16619 201 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CTU2Q2VPK5 515 aaKnown RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 TTC31Q49AM3 519 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 IQCCQ4KMZ1 466 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 LACTB2Q53H82 288 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SYT14P1Q58G82 188 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 PRSS55Q6UWB4 352 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 C1orf186Q6ZWK4 172 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 ADGRG3Q86Y34 549 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 MAP7D3Q8IWC1 876 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CCDC83Q8IWF9 413 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 DNAJC10Q8IXB1 793 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 ZNF611Q8N823 705 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 ZNF548Q8NEK5 533 aaPredicted RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 LPCAT1Q8NF37 534 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SPATA22Q8NHS9 363 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 DDB2Q92466 427 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 FIG4Q92562 907 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 MOB3AQ96BX8 217 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SPATA13Q96N96 652 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 KLHL5Q96PQ7 755 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 MTERF1Q99551 399 aaKnown RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 BTBD10Q9BSF8 475 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 LMF2Q9BU23 707 aaKnown RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 GTPBP2Q9BX10 602 aaKnown RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SLC2A11Q9BYW1 496 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 SRD5A3Q9H8P0 318 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 LIN28AQ9H9Z2 209 aaKnown RBP4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 CDH20Q9HBT6 801 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 ZBTB40Q9NUA8 1239 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 PDRG1Q9NUG6 133 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 C11orf21Q9P2W6 132 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 IL19Q9UHD0 177 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 BLOC1S6Q9UL45 172 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 TMCC3Q9ULS5 477 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 STX8Q9UNK0 236 aa4.02□□□□□ -1.77
HMGN3P1-201ENST00000453847 RPH3AQ9Y2J0 694 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms