RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TAS2R13Q9NYV9 303 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
VPS33A-202ENST00000451053 PADI4Q9UM07 663 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 DHRS7Q9Y394 339 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 ACTL7BQ9Y614 415 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 ARID1BQ8NFD5 2236 aaPredicted RBP12.74□□□□□ -0.37
VPS33A-202ENST00000451053 ARHGEF17Q96PE2 2063 aaPredicted RBP12.74□□□□□ -0.37
VPS33A-202ENST00000451053 FRYLO94915 3013 aa12.74□□□□□ -0.37
VPS33A-202ENST00000451053 KIR2DS5A0A0G2JLQ3 304 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 A0A0G2JNG1 304 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 OR5K4A6NMS3 321 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 TRIM49D1C9J1S8 452 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 KIR2DS3K7RE56 304 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 SLCO2B1O94956 709 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 SYF2O95926 243 aaKnown RBP12.73□□□□□ -0.37
VPS33A-202ENST00000451053 MT-ND3P03897 115 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 CKMT1AP12532 417 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 CKMT2P17540 419 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 CSRP1P21291 193 aaKnown RBP12.73□□□□□ -0.37
VPS33A-202ENST00000451053 SAT1P21673 171 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 SLC19A1P41440 591 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 HALP42357 657 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 RPIAP49247 311 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 SLC12A2P55011 1212 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 TAS2R39P59534 338 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 UBE2IP63279 158 aaKnown RBP12.73□□□□□ -0.37
VPS33A-202ENST00000451053 KIR2DS5Q14953 304 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 RPE65Q16518 533 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 ACSBG2Q5FVE4 666 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 TNFAIP8L3Q5GJ75 292 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 GUSBP11Q6P575 273 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 TIFABQ6ZNK6 161 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 CCDC91Q7Z6B0 441 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 CPNE9Q8IYJ1 553 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 INPP5DQ92835 1189 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 ALKBH8Q96BT7 664 aaKnown RBP12.73□□□□□ -0.37
VPS33A-202ENST00000451053 TSPAN17Q96FV3 270 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 C12orf66Q96MD2 445 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 GPR22Q99680 433 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 CDC6Q99741 560 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 SLC32A1Q9H598 525 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 CAB39LQ9H9S4 337 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 IMP3Q9NV31 184 aaKnown RBP12.73□□□□□ -0.37
VPS33A-202ENST00000451053 CPNE7Q9UBL6 633 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 TRMT6Q9UJA5 497 aaKnown RBP12.73□□□□□ -0.37
VPS33A-202ENST00000451053 SLC39A10Q9ULF5 831 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 NOVA2Q9UNW9 492 aaKnown RBP12.73□□□□□ -0.37
VPS33A-202ENST00000451053 VWA7Q9Y334 891 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 RNF215Q9Y6U7 377 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 LAMA1P25391 3075 aa12.73□□□□□ -0.37
VPS33A-202ENST00000451053 HMX2A2RU54 273 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 CPED1A4D0V7 1026 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 IFRD1O00458 451 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 GIPC1O14908 333 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 PPM1DO15297 605 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 TNFSF14O43557 240 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 MTHFD1P11586 935 aaKnown RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 XRCC1P18887 633 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 CD9P21926 228 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 ACADLP28330 430 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 ACADVLP49748 655 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 POU4F1Q01851 419 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 HHEXQ03014 270 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 BMPR2Q13873 1038 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 ZNF460Q14592 562 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 TRIP6Q15654 476 aaKnown RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 PERM1Q5SV97 790 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 MROH9Q5TGP6 573 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 PAQR3Q6TCH7 311 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 EFL1Q7Z2Z2 1120 aaKnown RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 SLC9B2Q86UD5 537 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 TRABD2AQ86V40 505 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 ZNF761Q86XN6 746 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 CEP97Q8IW35 865 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 TRIM48Q8IWZ4 208 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 CYP4X1Q8N118 509 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 ACMSDQ8TDX5 336 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 MZB1Q8WU39 189 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 ARL8AQ96BM9 186 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 TLCD1Q96CP7 247 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 CXorf40BQ96DE9 158 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 CABS1Q96KC9 395 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 SMC6Q96SB8 1091 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 RTKNQ9BST9 563 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 NCKIPSDQ9NZQ3 722 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 KLHL42Q9P2K6 505 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 LRIT1Q9P2V4 623 aa12.72□□□□□ -0.37
VPS33A-202ENST00000451053 RUVBL2Q9Y230 463 aaKnown RBP12.72□□□□□ -0.37
VPS33A-202ENST00000451053 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 EME2A4GXA9 379 aaPredicted RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 NUDT21O43809 227 aaKnown RBP12.71□□□□□ -0.37
VPS33A-202ENST00000451053 VIPP01282 170 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 STMN1P16949 149 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 ACP1P24666 158 aa12.71□□□□□ -0.37
VPS33A-202ENST00000451053 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms