RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 LIN7BQ9HAP6 207 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 BTBD3Q9Y2F9 522 aa13.25□□□□□ -0.29
SYNGAP1-204ENST00000449372 CCDC154A6NI56 674 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 M0QZ92 97 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 NME4O00746 187 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 DCLK1O15075 740 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 GPR182O15218 404 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZBTB24O43167 697 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 ARHGEF9O43307 516 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 SOAT2O75908 522 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 CTSHP09668 335 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 CPB1P15086 417 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 LHX1P48742 406 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 TRAF3Q13114 568 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 SEMA3BQ13214 749 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 EML3Q32P44 896 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 TIGD5Q53EQ6 642 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 COQ5Q5HYK3 327 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 CCNJQ5T5M9 372 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 SHEQ5VZ18 495 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 METTL2BQ6P1Q9 378 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 FAM171BQ6P995 826 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 PRSS48Q7RTY5 328 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 CUZD1Q86UP6 607 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 LURAP1LQ8IV03 231 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 PARP16Q8N5Y8 322 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 KDM1BQ8NB78 822 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 PGAP3Q96FM1 320 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 ROGDIQ9GZN7 287 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 TM9SF3Q9HD45 589 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 RANGRFQ9HD47 186 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 OPTCQ9UBM4 332 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 A0A0U1RQF3 1178 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 PDGFAP04085 211 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 THRBP10828 461 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 CCNCP24863 283 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 AVPR1AP37288 418 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 IL12RB1P42701 662 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 SCNN1GP51170 649 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 MAPK12P53778 367 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 GNA13Q14344 377 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 ARTNQ5T4W7 220 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 LCN8Q6JVE9 175 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF517Q6ZMY9 492 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 FAM35AQ86V20 835 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 AADATQ8N5Z0 425 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 FYTTD1Q96QD9 318 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 NUAK2Q9H093 628 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 DDIT4Q9NX09 232 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 OSGIN1Q9UJX0 560 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 TTC24A2A3L6 582 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 BET1O15155 118 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 KATNA1O75449 491 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 GGT5P36269 586 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 ARSFP54793 590 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 KCNK10P57789 538 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 ZNF45Q02386 682 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 EIF4EBP2Q13542 120 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 VN1R5Q7Z5H4 357 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 PELI3Q8N2H9 469 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 OR10Z1Q8NGY1 313 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 TSGA13Q96PP4 275 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 POLR3BQ9NW08 1133 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 BPTFQ12830 3046 aa13.24□□□□□ -0.29
SYNGAP1-204ENST00000449372 M0QZQ0 153 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 FGF10O15520 208 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 SGTAO43765 313 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 CD52P31358 61 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 DAOAP59103 153 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 TOP3AQ13472 1001 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 PON2Q15165 354 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 RAP1GAP2Q684P5 730 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 CNTN4Q8IWV2 1026 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 RPL3LQ92901 407 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 TMEM80Q96HE8 168 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 PIGVQ9NUD9 493 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 GLTPQ9NZD2 209 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 EHD3Q9NZN3 535 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 CDH9Q9ULB4 789 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 ARPC2O15144 300 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 MTHFD1P11586 935 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 FSHRP23945 695 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 PSMB9P28065 219 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 RABGGTBP53611 331 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 CSHL1Q14406 222 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 TPRG1LQ5T0D9 272 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 C8orf82Q6P1X6 216 aaPredicted RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 ANKRD53Q8N9V6 530 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 C7orf57Q8NEG2 295 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 IPMKQ8NFU5 416 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 TTLQ8NG68 377 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 REXO5Q96IC2 774 aaKnown RBP13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 FCRL5Q96RD9 977 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 SEPHS2Q99611 448 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 UCK2Q9BZX2 261 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 LTB4R2Q9NPC1 389 aa13.23□□□□□ -0.29
SYNGAP1-204ENST00000449372 ANAPC2Q9UJX6 822 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms