RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MARCH4Q9P2E8 410 aaPredicted RBP14.23□□□□□ -0.13
USP39-206ENST00000448971 PISDQ9UG56 409 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 IGHV5-10-1A0A0J9YXX1 117 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 UBA6A0AVT1 1052 aaPredicted RBP14.22□□□□□ -0.13
USP39-206ENST00000448971 SDR42E2A6NKP2 422 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 GOLGA8KD6RF30 607 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 GOLGA8TH3BQL2 631 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 PFDN6O15212 129 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 NDUFS3O75489 264 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 UBXN7O94888 489 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 TYRP1P17643 537 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 CAPZBP47756 277 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 PREPP48147 710 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 LIMK2P53671 638 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 DHX34Q14147 1143 aaKnown RBP14.22□□□□□ -0.13
USP39-206ENST00000448971 C16orf72Q14CZ0 275 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 BRD3Q15059 726 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 ARMC3Q5W041 872 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 MRNIPQ6NTE8 343 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 TMEM71Q6P5X7 295 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 HOOK3Q86VS8 718 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 JPH3Q8WXH2 748 aaPredicted RBP14.22□□□□□ -0.13
USP39-206ENST00000448971 RSC1A1Q92681 617 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 EXTL1Q92935 676 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 TMEM159Q96B96 161 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 TRIM44Q96DX7 344 aaPredicted RBP14.22□□□□□ -0.13
USP39-206ENST00000448971 INSM2Q96T92 566 aaPredicted RBP14.22□□□□□ -0.13
USP39-206ENST00000448971 TRIM56Q9BRZ2 755 aaKnown RBP14.22□□□□□ -0.13
USP39-206ENST00000448971 TRIM31Q9BZY9 425 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 FAM117AQ9C073 453 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 SLC40A1Q9NP59 571 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 RPS6KL1Q9Y6S9 549 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 RELNP78509 3460 aa14.22□□□□□ -0.13
USP39-206ENST00000448971 LRRK2Q5S007 2527 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 FAM237BA0A1B0GVD1 139 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 A8MU76 341 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 PRMT5O14744 637 aaPredicted RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 LIN7AO14910 233 aaPredicted RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 HGSO14964 777 aaPredicted RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 SUV39H1O43463 412 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 ITIH1P19827 911 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 ARNTP27540 789 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 EIF3BP55884 814 aaKnown RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 SRSF1Q07955 248 aaKnown RBP eCLIP14.21□□□□□ -0.133e-6■■■■■ 29.6
USP39-206ENST00000448971 C2orf54Q08AI8 447 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 TRA2AQ13595 282 aaKnown RBP eCLIP14.21□□□□□ -0.13
USP39-206ENST00000448971 DNAJC21Q5F1R6 531 aaKnown RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 RNF187Q5TA31 235 aaPredicted RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 PTRHD1Q6GMV3 140 aaKnown RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 WDR74Q6RFH5 385 aaPredicted RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 ZNF574Q6ZN55 896 aaPredicted RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 SDCCAG8Q86SQ7 713 aaPredicted RBP14.21□□□□□ -0.13
USP39-206ENST00000448971 FAM129CQ86XR2 697 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 PLXDC1Q8IUK5 500 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 STAMBPL1Q96FJ0 436 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 TRIM4Q9C037 500 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 IL1RAPL1Q9NZN1 696 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 GNPTGQ9UJJ9 305 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 HEBP2Q9Y5Z4 205 aa14.21□□□□□ -0.13
USP39-206ENST00000448971 MN1Q10571 1320 aaPredicted RBP14.2□□□□□ -0.14
USP39-206ENST00000448971 MAGEB16A2A368 324 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 EFCAB8A8MWE9 144 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 LIPCP11150 499 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 WT1P19544 449 aaPredicted RBP14.2□□□□□ -0.14
USP39-206ENST00000448971 OGNP20774 298 aaKnown RBP14.2□□□□□ -0.14
USP39-206ENST00000448971 NDUFS1P28331 727 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 CSTF2P33240 577 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP39-206ENST00000448971 MAGEA3P43357 314 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 MAPK10P53779 464 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 CSE1LP55060 971 aaKnown RBP14.2□□□□□ -0.14
USP39-206ENST00000448971 GFERP55789 205 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 NFKB2Q00653 900 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 RPA4Q13156 261 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 SQSTM1Q13501 440 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 THOC5Q13769 683 aaKnown RBP14.2□□□□□ -0.14
USP39-206ENST00000448971 MORF4L2Q15014 288 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 TMED2Q15363 201 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 ANKRD20A4Q4UJ75 823 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 ZNF470Q6ECI4 717 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 IRGCQ6NXR0 463 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 KLHL35Q6PF15 583 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 NAPRTQ6XQN6 538 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 DTX1Q86Y01 620 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 AGBL5Q8NDL9 886 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 LKAAEAR1Q8TD35 194 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 SNF8Q96H20 258 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 TGM7Q96PF1 710 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 PANX3Q96QZ0 392 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 HGH1Q9BTY7 390 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 OR52A5Q9H2C5 316 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 SLC24A3Q9HC58 644 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 HEMK1Q9Y5R4 338 aaPredicted RBP14.2□□□□□ -0.14
USP39-206ENST00000448971 COLEC10Q9Y6Z7 277 aa14.2□□□□□ -0.14
USP39-206ENST00000448971 IQCF5A8MTL0 148 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 BANF1O75531 89 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 RASSF9O75901 435 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 USP1O94782 785 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 FAM87AP0C7U9 286 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 PGAM1P18669 254 aa14.19□□□□□ -0.14
USP39-206ENST00000448971 PDHA2P29803 388 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms