RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 COMMD10Q9Y6G5 202 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 AK5Q9Y6K8 562 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 ZZEF1O43149 2961 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 TRABD2BA6NFA1 517 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 KDM1AO60341 852 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 NIPSNAP2O75323 286 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 GPC4O75487 556 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 HAUS5O94927 633 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 RPN2P04844 631 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 F7P08709 466 aaPredicted RBP13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 GSTA2P09210 222 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 CCKBRP32239 447 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 LEPRP48357 1165 aaKnown RBP13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 PDX1P52945 283 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 TTLL9Q3SXZ7 439 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 SNAP47Q5SQN1 464 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 PLEKHS1Q5SXH7 462 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 TEDDM1Q5T9Z0 273 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 UGT3A1Q6NUS8 523 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 ARMC6Q6NXE6 501 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 TRMT10BQ6PF06 316 aaKnown RBP13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 CNSTQ6PJW8 725 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 WDR74Q6RFH5 385 aaPredicted RBP13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 ZDHHC24Q6UX98 284 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 B3GNT8Q7Z7M8 397 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 CNTN4Q8IWV2 1026 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 SLC22A15Q8IZD6 547 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 KDF1Q8NAX2 398 aaPredicted RBP13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 PHC3Q8NDX5 983 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 CDKL2Q92772 493 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 FAM136AQ96C01 138 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 NXPE2Q96DL1 559 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 FOPNLQ96NB1 174 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 HGH1Q9BTY7 390 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 TRIT1Q9H3H1 467 aaKnown RBP13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 DMGDHQ9UI17 866 aaKnown RBP13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 SLC24A2Q9UI40 661 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 ZMIZ1Q9ULJ6 1067 aa13.67□□□□□ -0.22
GTF3C3-206ENST00000448539 CCDC187A0A096LP49 1063 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 ESPNB1AK53 854 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 BHMG1C9JSJ3 638 aaPredicted RBP13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 VPS26AO75436 327 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 SLCO2B1O94956 709 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 HOXB3P14651 431 aaPredicted RBP13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 MPSTP25325 297 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 ACADLP28330 430 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 CSF2RBP32927 897 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 MAGEA4P43358 317 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 LIMK2P53671 638 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 ZFP36L1Q07352 338 aaKnown RBP13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 ABRQ12979 859 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 EIF3IQ13347 325 aaKnown RBP13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 CAMK2BQ13554 666 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 TRA2AQ13595 282 aaKnown RBP eCLIP13.66□□□□□ -0.226e-7■■■■□ 25.8
GTF3C3-206ENST00000448539 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 C3orf62Q6ZUJ4 267 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 TMPRSS9Q7Z410 1059 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 GALNT7Q86SF2 657 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 OOSP2Q86WS3 158 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 SLITRK4Q8IW52 837 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 TBC1D21Q8IYX1 336 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 ZBTB2Q8N680 514 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 CFAP61Q8NHU2 1237 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 WDR36Q8NI36 951 aaKnown RBP13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 LCN9Q8WX39 176 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 JPH3Q8WXH2 748 aaPredicted RBP13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 KCNJ9Q92806 393 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 LIN37Q96GY3 246 aaPredicted RBP13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 C9orf72Q96LT7 481 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 CCDC74BQ96LY2 380 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 TSPYL1Q9H0U9 437 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 SEMA6CQ9H3T2 930 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 SRMSQ9H3Y6 488 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 PLAC1Q9HBJ0 212 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 NSMCE4AQ9NXX6 385 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 MOCS1Q9NZB8 636 aa13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 TDRKHQ9Y2W6 561 aaKnown RBP13.66□□□□□ -0.22
GTF3C3-206ENST00000448539 PTPRBP23467 1997 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 IGHV5-10-1A0A0J9YXX1 117 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 AGRPO00253 132 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 CAPN5O15484 640 aaPredicted RBP13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 ZNF500O60304 480 aaPredicted RBP13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 AHSGP02765 367 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 MPOP05164 745 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 THRAP10827 490 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 SSTR1P30872 391 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 CAPZBP47756 277 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 GABREP78334 506 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 PRKAA1Q13131 559 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 PRKG2Q13237 762 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 IRGCQ6NXR0 463 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 ZNF549Q6P9A3 640 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 TTC23LQ6PF05 361 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 ZNF574Q6ZN55 896 aaPredicted RBP13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 RAB11FIP2Q7L804 512 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 VRK3Q8IV63 474 aa13.65□□□□□ -0.22
GTF3C3-206ENST00000448539 IFT20Q8IY31 132 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms