RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SLC16A5O15375 505 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 SNX2O60749 519 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 SBK3P0C264 359 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 DHRS4L1P0CG22 281 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 MYL2P10916 166 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 CPA3P15088 417 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 TAC1P20366 129 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 ACTR1BP42025 376 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 DPP6P42658 865 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 GYS2P54840 703 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 ACTR1AP61163 376 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 SP140Q13342 867 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 SLC30A9Q6PML9 568 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 UBE2R2Q712K3 238 aaPredicted RBP19.09■□□□□ 0.65
SGCE-207ENST00000447873 PDZD3Q86UT5 571 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 GPSM1Q86YR5 675 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 SPDYE1Q8NFV5 336 aaPredicted RBP19.09■□□□□ 0.65
SGCE-207ENST00000447873 GSDMCQ9BYG8 508 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 WWP1Q9H0M0 922 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 USP34Q70CQ2 3546 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 PABPN1LA6NDY0 278 aaKnown RBP19.08■□□□□ 0.65
SGCE-207ENST00000447873 PDZK1P1A8MUH7 402 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 G3V2L1 256 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 GFYI3L273 518 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 HOXD12P35452 270 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 IL9RQ01113 521 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 LPAL2Q16609 132 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 KIF19Q2TAC6 998 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 PRRT3Q5FWE3 981 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 PEAR1Q5VY43 1037 aaPredicted RBP19.08■□□□□ 0.65
SGCE-207ENST00000447873 ZC3H14Q6PJT7 736 aaKnown RBP19.08■□□□□ 0.65
SGCE-207ENST00000447873 ZYG11AQ6WRX3 759 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 GPBAR1Q8TDU6 330 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 SLC12A9Q9BXP2 914 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 TRIM54Q9BYV2 358 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 CAAP1Q9H8G2 361 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 PARVBQ9HBI1 364 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 PRDM8Q9NQV8 689 aa19.08■□□□□ 0.65
SGCE-207ENST00000447873 UTP6Q9NYH9 597 aaKnown RBP19.08■□□□□ 0.65
SGCE-207ENST00000447873 WDFY4Q6ZS81 3184 aa19.08■□□□□ 0.64
SGCE-207ENST00000447873 CACNA1EQ15878 2313 aa19.08■□□□□ 0.64
SGCE-207ENST00000447873 SUPT3HB4E1H0 165 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 SUPT3HO75486 399 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 CATP04040 527 aaKnown RBP19.07■□□□□ 0.64
SGCE-207ENST00000447873 BPGMP07738 259 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 HIST1H2AGP0C0S8 130 aaPredicted RBP19.07■□□□□ 0.64
SGCE-207ENST00000447873 TPBGLP0DKB5 382 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 HIST1H2ADP20671 130 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 CYP2A7P20853 494 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 KCNA4P22459 653 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 MAP4P27816 1152 aaKnown RBP19.07■□□□□ 0.64
SGCE-207ENST00000447873 ACADLP28330 430 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 TGFBIQ15582 683 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 PHKG1Q16816 387 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 RABEPKQ7Z6M1 372 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 DLG3Q92796 817 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 HIST1H2AHQ96KK5 128 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 RMDN2Q96LZ7 410 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 HIST1H2AJQ99878 128 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 H2AFJQ9BTM1 129 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 MECRQ9BV79 373 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 ZDHHC5Q9C0B5 715 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 ERVMER34-1Q9H9K5 563 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 TBC1D29Q9UFV1 150 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 WDR37Q9Y2I8 494 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 OARD1Q9Y530 152 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 R4GN57 208 aa19.07■□□□□ 0.64
SGCE-207ENST00000447873 NCF1BA6NI72 391 aaPredicted RBP19.06■□□□□ 0.64
SGCE-207ENST00000447873 NCF1CA8MVU1 366 aaPredicted RBP19.06■□□□□ 0.64
SGCE-207ENST00000447873 UBXN8O00124 270 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 BIRC5O15392 142 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 SMIM24O75264 130 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 PSIP1O75475 530 aaKnown RBP19.06■□□□□ 0.64
SGCE-207ENST00000447873 ENO2P09104 434 aaPredicted RBP19.06■□□□□ 0.64
SGCE-207ENST00000447873 NEFHP12036 1026 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 NCF1P14598 390 aaPredicted RBP19.06■□□□□ 0.64
SGCE-207ENST00000447873 ATP5F1P24539 256 aaPredicted RBP19.06■□□□□ 0.64
SGCE-207ENST00000447873 HALP42357 657 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 CTSKP43235 329 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 RPIAP49247 311 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 HNRNPKP61978 463 aaKnown RBP eCLIP19.06■□□□□ 0.641e-10■■■■■ 35.6
SGCE-207ENST00000447873 GUCY1A3Q02108 690 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 PCLAFQ15004 111 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 PPP1R3AQ16821 1122 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 DUOXA1Q1HG43 343 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 UAP1L1Q3KQV9 507 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 PRAMEF14Q5SWL7 426 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 CAPRIN2Q6IMN6 1127 aaKnown RBP19.06■□□□□ 0.64
SGCE-207ENST00000447873 UNC5DQ6UXZ4 953 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 TAF8Q7Z7C8 310 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 NRROSQ86YC3 692 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 NUDCD3Q8IVD9 361 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 CEP76Q8TAP6 659 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 MCOLN3Q8TDD5 553 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 TFGQ92734 400 aaPredicted RBP19.06■□□□□ 0.64
SGCE-207ENST00000447873 LRRC61Q9BV99 259 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 PDE10AQ9Y233 779 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 ASF1AQ9Y294 204 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 SNX11Q9Y5W9 270 aa19.06■□□□□ 0.64
SGCE-207ENST00000447873 TMEM131Q92545 1883 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms