RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 PLEKHA7Q6IQ23 1121 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 MYO7BQ6PIF6 2116 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 ADGRD1Q6QNK2 874 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 TMEM207Q6UWW9 146 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 B4GALNT4Q76KP1 1039 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 PPP1R32Q7Z5V6 425 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 ZGRF1Q86YA3 2104 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 TRAPPC5Q8IUR0 188 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 BEND7Q8N7W2 519 aaPredicted RBP6.87□□□□□ -1.31
LRRC28-203ENST00000447360 GPR26Q8NDV2 337 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 ARRDC2Q8TBH0 407 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 BRSK1Q8TDC3 778 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 CHTF18Q8WVB6 975 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 NR4A3Q92570 626 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 MAML1Q92585 1016 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 FATE1Q969F0 183 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 CNDP1Q96KN2 507 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 CSPG4P5Q96PW8 444 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 VPS35Q96QK1 796 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 SPOCK3Q9BQ16 436 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 AP1M1Q9BXS5 423 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 ADGRE3Q9BY15 652 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 KIR3DX1Q9H7L2 352 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 PARVAQ9NVD7 372 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 IFT80Q9P2H3 777 aaPredicted RBP6.87□□□□□ -1.31
LRRC28-203ENST00000447360 GPN3Q9UHW5 284 aaPredicted RBP6.87□□□□□ -1.31
LRRC28-203ENST00000447360 DNMT3AQ9Y6K1 912 aaPredicted RBP6.87□□□□□ -1.31
LRRC28-203ENST00000447360 AP1M2Q9Y6Q5 423 aa6.87□□□□□ -1.31
LRRC28-203ENST00000447360 MDC1Q14676 2089 aaKnown RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 CCDC66A2RUB6 948 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 TMEM191CA6NGB0 347 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 MASP2O00187 686 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 MATN3O15232 486 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 POP7O75817 140 aaKnown RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 FTLP02792 175 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 UMODP07911 640 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 MTHFD1P11586 935 aaKnown RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 CDH3P22223 829 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 MAPK1P28482 360 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 PCK1P35558 622 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 SMSP52788 366 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 TLE4Q04727 773 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 KLHL30Q0D2K2 578 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 PRKAA1Q13131 559 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 XRCC4Q13426 336 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 GTF2H3Q13889 308 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 SKOR2Q2VWA4 1001 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 MSS51Q4VC12 460 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 KHDC1Q4VXA5 237 aaKnown RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 BOLA3Q53S33 107 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 ALS2CLQ60I27 953 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 METRNLQ641Q3 311 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 TIGD7Q6NT04 549 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 RHBDD2Q6NTF9 364 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 PPP1R2P3Q6NXS1 205 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 MRPL14Q6P1L8 145 aaKnown RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 FBXO38Q6PIJ6 1188 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 GFRALQ6UXV0 394 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 TMC3Q7Z5M5 1100 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 CEP97Q8IW35 865 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 GPR135Q8IZ08 494 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 PROKR1Q8TCW9 393 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 MTFMTQ96DP5 389 aaKnown RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 PPM1MQ96MI6 270 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 TTC25Q96NG3 672 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 LMF1Q96S06 567 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 PITPNM3Q9BZ71 974 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 TRIM7Q9C029 511 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 LHPPQ9H008 270 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 ISCUQ9H1K1 167 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 MAGEE1Q9HCI5 957 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 IMP3Q9NV31 184 aaKnown RBP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 RBM22Q9NW64 420 aaKnown RBP eCLIP6.86□□□□□ -1.31
LRRC28-203ENST00000447360 NDOR1Q9UHB4 597 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 SLC24A2Q9UI40 661 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 FBXL4Q9UKA2 621 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 POMT2Q9UKY4 750 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 CAPN11Q9UMQ6 739 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 PSMD13Q9UNM6 376 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 VPS9D1Q9Y2B5 631 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 COLEC10Q9Y6Z7 277 aa6.86□□□□□ -1.31
LRRC28-203ENST00000447360 ACANP16112 2415 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 CCDC78A2IDD5 438 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 KLHL33A6NCF5 533 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 FANCGO15287 622 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 DDX3YO15523 660 aaKnown RBP6.85□□□□□ -1.31
LRRC28-203ENST00000447360 PRMT3O60678 531 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 CLDN14O95500 239 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 CBSLP0DN79 551 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 POLR2CP19387 275 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-203ENST00000447360 HLA-DPA1P20036 260 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 PTMSP20962 102 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 MMP11P24347 488 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 CCNCP24863 283 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 NDUFS1P28331 727 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 PRDX3P30048 256 aaKnown RBP6.85□□□□□ -1.31
LRRC28-203ENST00000447360 CBSP35520 551 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 KIR3DL1P43629 444 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 ART1P52961 327 aa6.85□□□□□ -1.31
LRRC28-203ENST00000447360 CASP6P55212 293 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms