RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ZC3H12BQ5HYM0 836 aaKnown RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 ZNF691Q5VV52 312 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 GLB1LQ6UWU2 654 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 MILR1Q7Z6M3 343 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 GPR149Q86SP6 731 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 ZBTB46Q86UZ6 589 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 MSRB3Q8IXL7 192 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 PARP8Q8N3A8 854 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SH3YL1Q96HL8 342 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 EXOC2Q96KP1 924 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 NODALQ96S42 347 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 IKZF5Q9H5V7 419 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 CCSER2Q9H7U1 834 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 IPPKQ9H8X2 491 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SARS2Q9NP81 518 aaKnown RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 LTB4R2Q9NPC1 389 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 DCAF13Q9NV06 445 aaKnown RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SLC25A37Q9NYZ2 338 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 AGO1Q9UL18 857 aaKnown RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 CLDN25C9JDP6 229 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SLC1A7O00341 560 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 RGS14O43566 566 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 ACSL4O60488 711 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 UGT2B11O75310 529 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 S100BP04271 92 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 IL6P05231 212 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 UGT2B4P06133 528 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 RPL38P63173 70 aaKnown RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 PLIN5Q00G26 463 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 ZNF846Q147U1 533 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 CTF1Q16619 201 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 RFX4Q33E94 735 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 RUNDC3AQ59EK9 446 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SPESP1Q6UW49 350 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 HS3ST5Q8IZT8 346 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 EID3Q8N140 333 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 FAM162AQ96A26 154 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 SPON2Q9BUD6 331 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.74■□□□□ 0.598e-21■■■■■ 43.8
SDCBP-204ENST00000447182 ASIC5Q9NY37 505 aa18.74■□□□□ 0.59
SDCBP-204ENST00000447182 ZFP37Q9Y6Q3 630 aaPredicted RBP18.74■□□□□ 0.59
SDCBP-204ENST00000447182 GOLGA8CPA6NN73 597 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 KPNA4O00629 521 aaPredicted RBP18.73■□□□□ 0.59
SDCBP-204ENST00000447182 RAD51BO15315 384 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 FFAR2O15552 330 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 TLR5O60602 858 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 PRKD3O94806 890 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 GLUD1P00367 558 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 AGXTP21549 392 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 DCTP40126 519 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 OPRL1P41146 370 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 PTGR1Q14914 329 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 FAM174BQ3ZCQ3 159 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 CTXN3Q4LDR2 81 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 EGFLAMQ63HQ2 1017 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 MICU2Q8IYU8 434 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 ZCCHC7Q8N3Z6 543 aaKnown RBP18.73■□□□□ 0.59
SDCBP-204ENST00000447182 SPATA17Q96L03 361 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 BPIFA1Q9NP55 256 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 EVLQ9UI08 416 aaPredicted RBP18.73■□□□□ 0.59
SDCBP-204ENST00000447182 UTS2RQ9UKP6 389 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 PCDHB1Q9Y5F3 818 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 PCDHGC4Q9Y5F7 938 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 VWA8A3KMH1 1905 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 TRBV5-3A0A0A0MS03 114 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 IQCF5A8MTL0 148 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 PGRP06401 933 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 IDUAP35475 653 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 GP2P55259 537 aaKnown RBP18.73■□□□□ 0.59
SDCBP-204ENST00000447182 TRIM32Q13049 653 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 LAPTM5Q13571 262 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 PLA2G4EQ3MJ16 856 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 PIK3C3Q8NEB9 887 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 SOCS4Q8WXH5 440 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 VMP1Q96GC9 406 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 CEP295NLQ96MC4 621 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 DGCR6LQ9BY27 220 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 CLMPQ9H6B4 373 aa18.73■□□□□ 0.59
SDCBP-204ENST00000447182 M0QX08 132 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 SLC28A1O00337 649 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 PRMT5O14744 637 aaPredicted RBP18.72■□□□□ 0.59
SDCBP-204ENST00000447182 OR1G1P47890 313 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 OCA2Q04671 838 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 CACNG1Q06432 222 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 MRPL58Q14197 206 aaKnown RBP18.72■□□□□ 0.59
SDCBP-204ENST00000447182 OXA1LQ15070 435 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 PON2Q15165 354 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 ATG9BQ674R7 924 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 TAS2R42Q7RTR8 314 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 PLPP6Q8IY26 295 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 DNAJB8Q8NHS0 232 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 MROQ9BYG7 248 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 DPY30Q9C005 99 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 TRIT1Q9H3H1 467 aaKnown RBP18.72■□□□□ 0.59
SDCBP-204ENST00000447182 KAT8Q9H7Z6 458 aaKnown RBP18.72■□□□□ 0.59
SDCBP-204ENST00000447182 HMG20AQ9NP66 347 aa18.72■□□□□ 0.59
SDCBP-204ENST00000447182 PAK1IP1Q9NWT1 392 aaPredicted RBP18.72■□□□□ 0.59
SDCBP-204ENST00000447182 TMEFF2Q9UIK5 374 aaPredicted RBP18.72■□□□□ 0.59
SDCBP-204ENST00000447182 ILVBLA1L0T0 632 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms