RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 NPY2RP49146 381 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 FNTAP49354 379 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 SH3BP2P78314 561 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 SARNPP82979 210 aaKnown RBP13.66□□□□□ -0.22
TREX1-202ENST00000444177 CDK16Q00536 496 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 ACVR1Q04771 509 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 ABHD18Q0P651 414 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 SYTL3Q4VX76 610 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 ANKRD22Q5VYY1 191 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 IRGCQ6NXR0 463 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 LRRC8BQ6P9F7 803 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 BORAQ6PGQ7 559 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 PACS1Q6VY07 963 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 OTUD6BQ8N6M0 293 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 GRK7Q8WTQ7 553 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 PEX13Q92968 403 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 ZDHHC12Q96GR4 267 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 ZNF768Q9H5H4 540 aaKnown RBP13.66□□□□□ -0.22
TREX1-202ENST00000444177 CATSPERZQ9NTU4 200 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 EPHA6Q9UF33 1036 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 ANAPC5Q9UJX4 755 aa13.66□□□□□ -0.22
TREX1-202ENST00000444177 HEMK1Q9Y5R4 338 aaPredicted RBP13.66□□□□□ -0.22
TREX1-202ENST00000444177 PYCARD-AS1I3L0S3 204 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 IFRD1O00458 451 aaPredicted RBP13.65□□□□□ -0.22
TREX1-202ENST00000444177 OR1I1O60431 355 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 TMEM63AO94886 807 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 DLGAP3O95886 979 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 OR56A5P0C7T3 313 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 NMBRP28336 390 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 BOP1Q14137 746 aaKnown RBP13.65□□□□□ -0.22
TREX1-202ENST00000444177 SEMA3AQ14563 771 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 IL11RAQ14626 422 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
TREX1-202ENST00000444177 CACHD1Q5VU97 1274 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 CASC4Q6P4E1 433 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 ZNF449Q6P9G9 518 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 SYT10Q6XYQ8 523 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 CERS6Q6ZMG9 384 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 FAM92BQ6ZTR7 304 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 PRICKLE2Q7Z3G6 844 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 PRSS42Q7Z5A4 293 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 CREG2Q8IUH2 290 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 KLHL6Q8WZ60 621 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 CPT1BQ92523 772 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 ELMO1Q92556 727 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 CAPZA3Q96KX2 299 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 OR6C1Q96RD1 312 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 EFHD1Q9BUP0 239 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 RAB33BQ9H082 229 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 IL17BQ9UHF5 180 aa13.65□□□□□ -0.22
TREX1-202ENST00000444177 GOLGA8MH3BSY2 632 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 GSTM1P09488 218 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 ZNF28P17035 718 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 NDUFS1P28331 727 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 PPARGP37231 505 aaPredicted RBP13.64□□□□□ -0.23
TREX1-202ENST00000444177 PAFAH1B1P43034 410 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 MAGEA6P43360 314 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 PPP1CAP62136 330 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 NFKB2Q00653 900 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 GSTM4Q03013 218 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 MAP7Q14244 749 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 BRD3Q15059 726 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 CAPRIN2Q6IMN6 1127 aaKnown RBP13.64□□□□□ -0.23
TREX1-202ENST00000444177 KLHL35Q6PF15 583 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 CES3Q6UWW8 571 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 LDB1Q86U70 411 aaPredicted RBP13.64□□□□□ -0.23
TREX1-202ENST00000444177 OOSP2Q86WS3 158 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 ESX1Q8N693 406 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 RNF31Q96EP0 1072 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 RUNDC3BQ96NL0 473 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 CATSPER2Q96P56 530 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 FERD3LQ96RJ6 166 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 ULBP3Q9BZM4 244 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 DDX47Q9H0S4 455 aaKnown RBP13.64□□□□□ -0.23
TREX1-202ENST00000444177 SLC25A18Q9H1K4 315 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 ADNPQ9H2P0 1102 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 KIR3DX1Q9H7L2 352 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 MRM3Q9HC36 420 aaKnown RBP13.64□□□□□ -0.23
TREX1-202ENST00000444177 TREX1Q9NSU2 369 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 MARCH4Q9P2E8 410 aaPredicted RBP13.64□□□□□ -0.23
TREX1-202ENST00000444177 SOX13Q9UN79 622 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 HEBP2Q9Y5Z4 205 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 COLEC10Q9Y6Z7 277 aa13.64□□□□□ -0.23
TREX1-202ENST00000444177 F8W8V4 182 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 CCDC188H7C350 402 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 LIN7AO14910 233 aaPredicted RBP13.63□□□□□ -0.23
TREX1-202ENST00000444177 CD3EAPO15446 510 aaKnown RBP13.63□□□□□ -0.23
TREX1-202ENST00000444177 SUV39H1O43463 412 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 AVILO75366 819 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 PRKAR1AP10644 381 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 FGF5P12034 268 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 NELFEP18615 380 aaKnown RBP13.63□□□□□ -0.23
TREX1-202ENST00000444177 PDHA2P29803 388 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 STAT5AP42229 794 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 CCR10P46092 362 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 TTPAP49638 278 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 POLE2P56282 527 aa13.63□□□□□ -0.23
TREX1-202ENST00000444177 RPA4Q13156 261 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms