RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MVB12BQ9H7P6 319 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 COG4Q9H9E3 785 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 ACSS2Q9NR19 701 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 SERTAD3Q9UJW9 196 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 PCDHGA9Q9Y5G4 932 aaKnown RBP20.16■□□□□ 0.82
CPNE1-219ENST00000440240 USP9YO00507 2555 aaPredicted RBP20.16■□□□□ 0.82
CPNE1-219ENST00000440240 IGLV3-16A0A075B6K0 115 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 GSAPA4D1B5 854 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 H7C0S8 307 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 GSTM1P09488 218 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 MC4RP32245 332 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 CCL11P51671 97 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 PGDP52209 483 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 GSTM4Q03013 218 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 PARP6Q2NL67 630 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 KLHDC8BQ8IXV7 354 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 DSELQ8IZU8 1212 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 PANX2Q96RD6 677 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 FAM118BQ9BPY3 351 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 SLC25A23Q9BV35 468 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 NLNQ9BYT8 704 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 OR52A5Q9H2C5 316 aa20.15■□□□□ 0.82
CPNE1-219ENST00000440240 TRBV5-4A0A0C4DH59 114 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 RCCD1A6NED2 376 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 ARGFXA6NJG6 315 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 TTLL8A6PVC2 850 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 BTNL10A8MVZ5 291 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 PDGFAP04085 211 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 IL10RAQ13651 578 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 SPARCL1Q14515 664 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 ZRANB3Q5FWF4 1079 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 TAS2R42Q7RTR8 314 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 SERPINA9Q86WD7 417 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 TMTC1Q8IUR5 882 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 TTC13Q8NBP0 860 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 TFGQ92734 400 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-219ENST00000440240 PITPNM3Q9BZ71 974 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 MLXIPLQ9NP71 852 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 SNX7Q9UNH6 387 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 DUSP10Q9Y6W6 482 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 SEC16AO15027 2179 aa20.14■□□□□ 0.81
CPNE1-219ENST00000440240 USP9XQ93008 2570 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-219ENST00000440240 GOLGA6L9A6NEM1 432 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 C2orf74A8MZ97 194 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 BTN3A3O00478 584 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 VPS4BO75351 444 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 PTMAP06454 111 aaKnown RBP20.13■□□□□ 0.81
CPNE1-219ENST00000440240 CYP2A7P20853 494 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 ACRV1P26436 265 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 RORAP35398 523 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 ARHGEF18Q6ZSZ5 1173 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 AMIGO1Q86WK6 493 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 PHC3Q8NDX5 983 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 OR52E1Q8NGJ3 308 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 OR1L3Q8NH93 324 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 DNAJC1Q96KC8 554 aaKnown RBP20.13■□□□□ 0.81
CPNE1-219ENST00000440240 DPH2Q9BQC3 489 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-219ENST00000440240 SLC7A5P2Q9GIP4 190 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 ACTR5Q9H9F9 607 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-219ENST00000440240 NLE1Q9NVX2 485 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-219ENST00000440240 TCFL5Q9UL49 500 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 VPS4AQ9UN37 437 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 G3BP2Q9UN86 482 aaKnown RBP20.13■□□□□ 0.81
CPNE1-219ENST00000440240 PCDHGB7Q9Y5F8 929 aa20.13■□□□□ 0.81
CPNE1-219ENST00000440240 TMEM150CB9EJG8 249 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 BTN3A1O00481 513 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 CCL22O00626 93 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 AP2A2O94973 939 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 HBQ1P09105 142 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 PDHA2P29803 388 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 CDKN1CP49918 316 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-219ENST00000440240 CACNG1Q06432 222 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 ABRQ12979 859 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 ZNF658BQ4V348 819 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-219ENST00000440240 PRAMEF17Q5VTA0 474 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 PAPD7Q5XG87 772 aaKnown RBP20.12■□□□□ 0.81
CPNE1-219ENST00000440240 KCTD11Q693B1 232 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 CLDN19Q8N6F1 224 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 EFCAB3Q8N7B9 438 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 ENDOVQ8N8Q3 282 aaKnown RBP20.12■□□□□ 0.81
CPNE1-219ENST00000440240 ADAMTS17Q8TE56 1095 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 STYXQ8WUJ0 223 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 ALG3Q92685 438 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 CDKN2AIPNLQ96HQ2 116 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 TRAPPC9Q96Q05 1148 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 ALS2CR12Q96Q35 445 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 LRRC40Q9H9A6 602 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 PCMTD2Q9NV79 361 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 SPTBP11277 2137 aa20.12■□□□□ 0.81
CPNE1-219ENST00000440240 SOWAHDA6NJG2 315 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 QSOX1O00391 747 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 DDX3YO15523 660 aaKnown RBP20.11■□□□□ 0.81
CPNE1-219ENST00000440240 PSMD3O43242 534 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 GP1BBP13224 206 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 ST6GAL1P15907 406 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 TPH1P17752 444 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 CHAF1BQ13112 559 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 PRKG2Q13237 762 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 BOP1Q14137 746 aaKnown RBP20.11■□□□□ 0.81
CPNE1-219ENST00000440240 ZNF789Q5FWF6 425 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms