RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SHC3Q92529 594 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 THUMPD3Q9BV44 507 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 NXF3Q9H4D5 531 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 MAN1C1Q9NR34 630 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 SCP2D1Q9UJQ7 156 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF222Q9UK12 451 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PMF1-BGLAPU3KQ54 211 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 RBBP6Q7Z6E9 1792 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF182P17025 639 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 RPL7AP62424 266 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 NOMO3P69849 1222 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 NOMO1Q15155 1222 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 MPZL3Q6UWV2 235 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 ISLR2Q6UXK2 745 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 ARHGAP36Q6ZRI8 547 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 LRP10Q7Z4F1 713 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PHF13Q86YI8 300 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 TCTE3Q8IZS6 198 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 OR56A4Q8NGH8 313 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 REEP4Q9H6H4 257 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 AGPAT4Q9NRZ5 378 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 RPL36Q9Y3U8 105 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PLIN4Q96Q06 1357 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 LRRC72A6NJI9 287 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 RHPN2P1A8MT19 583 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 DISC1C4P0D8 188 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 C9IYK1 514 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 VILLO15195 856 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PGK1P00558 417 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 CYP3A4P08684 503 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 IDUAP35475 653 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 NAE1Q13564 534 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 TDRD10Q5VZ19 366 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 NT5DC4Q86YG4 428 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 RNF148Q8N7C7 305 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 OR1M1Q8NGA1 313 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 HTR3CQ8WXA8 447 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 TSNAXQ99598 290 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 C11orf16Q9NQ32 467 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 LATS2Q9NRM7 1088 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PIH1D1Q9NWS0 290 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 ZIM2Q9NZV7 527 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 ASH2LQ9UBL3 628 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 SNCAIPQ9Y6H5 919 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 KIAA1551Q9HCM1 1747 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 ZBTB24O43167 697 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PLIN3O60664 434 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 LALBAP00709 142 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 CYP11A1P05108 521 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 MATKP42679 507 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 ARPP19P56211 112 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 SOX10P56693 466 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 GNA12Q03113 381 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PTPN11Q06124 597 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 TMEM62Q0P6H9 643 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 CRY1Q16526 586 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 WDR53Q7Z5U6 358 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 TEX19Q8NA77 164 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 OR5H6Q8NGV6 325 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PHF21BQ96EK2 531 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 CHFRQ96EP1 664 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 MAELQ96JY0 434 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 DNTTIP1Q9H147 329 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 DPAGT1Q9H3H5 408 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 C14orf105Q9NVL8 296 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 THUMPD1Q9NXG2 353 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 COL20A1Q9P218 1284 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 TSPAN16Q9UKR8 245 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 CARNS1A5YM72 827 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 TISP43B9A030 160 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 STMND1H3BQB6 276 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 SUPT20HL2P0C7V6 817 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 TXNP10599 105 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 IGFBP5P24593 272 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 EVX2Q03828 476 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 STK11Q15831 433 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 HSDL2Q6YN16 418 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 SSX9Q7RTT3 188 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 STK40Q8N2I9 435 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 SPOCK2Q92563 424 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 APBA2Q99767 749 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 FUNDC2Q9BWH2 189 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 HPF1Q9NWY4 346 aa7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 PDCD11Q14690 1871 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-202ENST00000429713 KANTRA0A1W2PQU2 76 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 IPO13O94829 963 aaKnown RBP7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 RPN2P04844 631 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 PTGIRP43119 386 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 HNMTP50135 292 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 DCAF12L1Q5VU92 463 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 BSNDQ8WZ55 320 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 HEBP1Q9NRV9 189 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 PDCD5O14737 125 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 PDGFAP04085 211 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF14P17017 642 aaPredicted RBP7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 MAGEA11P43364 429 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 CLCN5P51795 746 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 GHRHRQ02643 423 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 ASAH1Q13510 395 aa7.41□□□□□ -1.22
SYNPO2-202ENST00000429713 ZNF655Q8N720 491 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms