RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 MATN4O95460 622 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 FAM107AO95990 144 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 RPS17P08708 135 aaKnown RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 GSTM1P09488 218 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 TPBGLP0DKB5 382 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 KITP10721 976 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ENO3P13929 434 aaPredicted RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 GFAPP14136 432 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 AOC1P19801 751 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 AKT2P31751 481 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 FNTBP49356 437 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 CDH13P55290 713 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 DNAJB13P59910 316 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 GSTM4Q03013 218 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 SRSF5Q13243 272 aaKnown RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 RCN2Q14257 317 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 SETDB1Q15047 1291 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 PYCR3Q53H96 274 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ATG16L1Q676U5 607 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ENPP7Q6UWV6 458 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 Q6ZSR6 202 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 FRMD7Q6ZUT3 714 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 FRA10AC1Q70Z53 315 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ARMCX6Q7L4S7 300 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 CHST15Q7LFX5 561 aaPredicted RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 MAVSQ7Z434 540 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ABI3BPQ7Z7G0 1075 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ADAMTSL2Q86TH1 951 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 TRIM42Q8IWZ5 723 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 CAMKK1Q8N5S9 505 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ZNF781Q8N8C0 355 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 TMEM105Q8N8V8 129 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 PDPRQ8NCN5 879 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 CCL4L1Q8NHW4 92 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 RAB3IL1Q8TBN0 382 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 AGR3Q8TD06 166 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 SKA2Q8WVK7 121 aaPredicted RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 ASZ1Q8WWH4 475 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ASB11Q8WXH4 323 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 TMEM159Q96B96 161 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 L3HYPDHQ96EM0 354 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 PRR11Q96HE9 360 aaPredicted RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 WDR92Q96MX6 357 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 C7orf26Q96N11 449 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ZDHHC5Q9C0B5 715 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 ZBTB26Q9HCK0 441 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 NPHS2Q9NP85 383 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 PRMT8Q9NR22 394 aaPredicted RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 GPR27Q9NS67 375 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 KLC4Q9NSK0 619 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 SPATA6Q9NWH7 488 aaPredicted RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 EIF2B4Q9UI10 523 aaKnown RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 KLF15Q9UIH9 416 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 WDR37Q9Y2I8 494 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 GPSM3Q9Y4H4 160 aa8.68□□□□□ -1.02
SMC6-204ENST00000428868 CFAP20Q9Y6A4 193 aaKnown RBP8.68□□□□□ -1.02
SMC6-204ENST00000428868 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 PRAMEF33A0A0G2JMD5 474 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 CCDC189A1A4V9 331 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 METTL12A8MUP2 240 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 PRR33A8MZF0 331 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 TMEM114B3SHH9 223 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 PRAMEF26H0Y7S4 382 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 H3BM21 787 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 EIF3FO00303 357 aaPredicted RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 NDUFAB1O14561 156 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 LIN7AO14910 233 aaPredicted RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 KMOO15229 486 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 SNX3O60493 162 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 NPHS1O60500 1241 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 NDUFS2O75306 463 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 PSIP1O75475 530 aaKnown RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 HSPA4LO95757 839 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 EML2O95834 649 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 JUNP05412 331 aaKnown RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 CELA2BP08218 269 aaPredicted RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 HOXC4P09017 264 aaPredicted RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 IMPDH1P20839 514 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 AK4P27144 223 aaPredicted RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 RPL10P27635 214 aaKnown RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 ACADLP28330 430 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 PRDX3P30048 256 aaKnown RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 GDF5P43026 501 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 HSPA7P48741 367 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 CCR3P51677 355 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 HERVK_113P63132 956 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 RPL6Q02878 288 aaKnown RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 EIF2B5Q13144 721 aaKnown RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 CACNA1EQ15878 2313 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 ALG11Q2TAA5 492 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 TUBB8Q3ZCM7 444 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 ZNF542PQ5EBM4 170 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 ARL13AQ5H913 290 aaPredicted RBP8.67□□□□□ -1.02
SMC6-204ENST00000428868 WDFY4Q6ZS81 3184 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 NEK10Q6ZWH5 1172 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 RD3Q7Z3Z2 195 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 PIGWQ7Z7B1 504 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 CPLX4Q7Z7G2 160 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 AMZ2Q86W34 360 aa8.67□□□□□ -1.02
SMC6-204ENST00000428868 GALNT13Q8IUC8 556 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms