RNA–Protein interactions for RNA: ENST00000428830.6

CHEK1-203, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-203ENST00000428830 SORT1Q99523 831 aa12.64□□□□□ -0.39
CHEK1-203ENST00000428830 ORAI3Q9BRQ5 295 aa12.64□□□□□ -0.39
CHEK1-203ENST00000428830 ACSS2Q9NR19 701 aa12.64□□□□□ -0.39
CHEK1-203ENST00000428830 CCDC163A0A0D9SF12 145 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 PABPN1LA6NDY0 278 aaKnown RBP12.63□□□□□ -0.39
CHEK1-203ENST00000428830 TNFRSF10CO14798 259 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 PSIP1O75475 530 aaKnown RBP12.63□□□□□ -0.39
CHEK1-203ENST00000428830 SUPT7LO94864 414 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 SNUPNO95149 360 aaKnown RBP12.63□□□□□ -0.39
CHEK1-203ENST00000428830 TGDSO95455 350 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 GUCA1CO95843 209 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 HIST1H2AGP0C0S8 130 aaPredicted RBP12.63□□□□□ -0.39
CHEK1-203ENST00000428830 HIST1H2ADP20671 130 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 CD27P26842 260 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 AP1S2P56377 157 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 OVGP1Q12889 678 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 SETDB1Q15047 1291 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 ARL13AQ5H913 290 aaPredicted RBP12.63□□□□□ -0.39
CHEK1-203ENST00000428830 CDKL4Q5MAI5 379 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 TPRG1LQ5T0D9 272 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 CGB2Q6NT52 195 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 FRMD7Q6ZUT3 714 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 RASGRP3Q8IV61 690 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHEK1-203ENST00000428830 OR13H1Q8NG92 308 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 CFAP61Q8NHU2 1237 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 FAM174AQ8TBP5 190 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 MCOLN3Q8TDD5 553 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 PDXPQ96GD0 296 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 HIST1H2AHQ96KK5 128 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 HIST1H2AJQ99878 128 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 EGFL8Q99944 293 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 ELAC2Q9BQ52 826 aaKnown RBP12.63□□□□□ -0.39
CHEK1-203ENST00000428830 H2AFJQ9BTM1 129 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 TRMOQ9BU70 441 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 C1QTNF3Q9BXJ4 246 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 CARS2Q9HA77 564 aaKnown RBP12.63□□□□□ -0.39
CHEK1-203ENST00000428830 ARL15Q9NXU5 204 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 PDE10AQ9Y233 779 aa12.63□□□□□ -0.39
CHEK1-203ENST00000428830 MAP3K13O43283 966 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 SNX3O60493 162 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 KCNJ13O60928 360 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 CATP04040 527 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 CHRNGP07510 517 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 MAP4P27816 1152 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 EEF1DP29692 281 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 GNPDA1P46926 289 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 NAA20P61599 178 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 CDKL1Q00532 357 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 PTK2BQ14289 1009 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 SULT1C3Q6IMI6 304 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 ATG14Q6ZNE5 492 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 SPATA21Q7Z572 469 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 PIWIL2Q8TC59 973 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 OR1E3Q8WZA6 343 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 OR2M4Q96R27 311 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 TRIM55Q9BYV6 548 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 OR52A5Q9H2C5 316 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 GSTO2Q9H4Y5 243 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 PRMT8Q9NR22 394 aaPredicted RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 AASDHPPTQ9NRN7 309 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 KLC4Q9NSK0 619 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 KLQ9UEF7 1012 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 ACSL5Q9ULC5 683 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 GPSM3Q9Y4H4 160 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 TNPO3Q9Y5L0 923 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 LAMA1P25391 3075 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 LRP4O75096 1905 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 SDK1Q7Z5N4 2213 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 TMEM221A6NGB7 291 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 ARHGEF33A8MVX0 844 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 MEI4A8MW99 385 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 M0R296 226 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 RPS17P08708 135 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 ANXA5P08758 320 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 AGTR2P50052 363 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 DMWDQ09019 674 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 GALNT1Q10472 559 aaPredicted RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 UNC50Q53HI1 259 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 ANKS6Q68DC2 871 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 TSSK4Q6SA08 328 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 PDZD3Q86UT5 571 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 LSMEM2Q8N112 164 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 SLC22A18ASQ8N1D0 253 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 DEFB119Q8N690 84 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 RHBDF1Q96CC6 855 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 HSPA12BQ96MM6 686 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 SLC6A18Q96N87 628 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 ILKAPQ9H0C8 392 aaPredicted RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 OSGEPL1Q9H4B0 414 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 EML4Q9HC35 981 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 NPHS2Q9NP85 383 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 GPR27Q9NS67 375 aa12.62□□□□□ -0.39
CHEK1-203ENST00000428830 EIF2B4Q9UI10 523 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 PTBP2Q9UKA9 531 aaKnown RBP12.62□□□□□ -0.39
CHEK1-203ENST00000428830 SPAG17Q6Q759 2223 aa12.61□□□□□ -0.39
CHEK1-203ENST00000428830 VPS13AQ96RL7 3174 aa12.61□□□□□ -0.39
CHEK1-203ENST00000428830 THADAQ6YHU6 1953 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms