RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TSPAN17Q96FV3 270 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 TTLL2Q9BWV7 592 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 TUBB1Q9H4B7 451 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 DYRK4Q9NR20 520 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 ZIM2Q9NZV7 527 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 GMPPBQ9Y5P6 360 aa15.83■□□□□ 0.12
C9orf3-206ENST00000428313 SOWAHBA6NEL2 793 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 INO80B-WBP1J3KQ70 363 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 ZBTB24O43167 697 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-206ENST00000428313 PSMD3O43242 534 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 ADORA3P0DMS8 318 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 TSPAN8P19075 237 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 PRKACGP22612 351 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 ATICP31939 592 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 CASP2P42575 452 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 RAP1GAP2Q684P5 730 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 RNF135Q8IUD6 432 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 LURAP1LQ8IV03 231 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 FBXO30Q8TB52 745 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 RNF139Q8WU17 664 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 DNAJA4Q8WW22 397 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-206ENST00000428313 POP5Q969H6 163 aaKnown RBP15.82■□□□□ 0.12
C9orf3-206ENST00000428313 TEX37Q96LM6 180 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 FRMD6Q96NE9 622 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 APOL2Q9BQE5 337 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 FAM83DQ9H4H8 585 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 PKP3Q9Y446 797 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 ANKRD28O15084 1053 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 MSCO60682 206 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 SEC22BO75396 215 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 EFNA5P52803 228 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 HYAL2Q12891 473 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 CAPSQ13938 189 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 IRF3Q14653 427 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 STK11Q15831 433 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 PROX2Q3B8N5 592 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 PKDCCQ504Y2 493 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 PRSS36Q5K4E3 855 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 TIGD7Q6NT04 549 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-206ENST00000428313 SHQ1Q6PI26 577 aaKnown RBP15.82■□□□□ 0.12
C9orf3-206ENST00000428313 ARHGAP36Q6ZRI8 547 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 TSPYL5Q86VY4 417 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-206ENST00000428313 SCUBE3Q8IX30 993 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 C2orf69Q8N8R5 385 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 ANKRD53Q8N9V6 530 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 NETO2Q8NC67 525 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 OR8J3Q8NGG0 315 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 RHBDF1Q96CC6 855 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 ZNF578Q96N58 590 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-206ENST00000428313 MID1IP1Q9NPA3 183 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 PXMP2Q9NR77 195 aa15.82■□□□□ 0.12
C9orf3-206ENST00000428313 ZNF638Q14966 1978 aaKnown RBP15.81■□□□□ 0.12
C9orf3-206ENST00000428313 TLL1O43897 1013 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 DNTTP04053 509 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 PFKLP17858 780 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 ELP6Q0PNE2 266 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 TMEM65Q6PI78 240 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 ABHD15Q6UXT9 468 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 DLEU7Q6UYE1 221 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 AHSA2Q719I0 299 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 PDZD4Q76G19 769 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-206ENST00000428313 LRRC8DQ7L1W4 858 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 CDAN1Q8IWY9 1227 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 TBC1D20Q96BZ9 403 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 REPS1Q96D71 796 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 MAGEB10Q96LZ2 347 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-206ENST00000428313 MMP28Q9H239 520 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 RIBC2Q9H4K1 309 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 LIMD1Q9UGP4 676 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 NDRG4Q9ULP0 352 aaKnown RBP15.81■□□□□ 0.12
C9orf3-206ENST00000428313 PCDHB5Q9Y5E4 795 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 KIAA1217Q5T5P2 1943 aa15.81■□□□□ 0.12
C9orf3-206ENST00000428313 A8MX80 341 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 TFECO14948 347 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 GSTA4O15217 222 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 KCNJ13O60928 360 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 MITFO75030 526 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 SERPINI2O75830 405 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 NR3C2P08235 984 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 MSH3P20585 1137 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 CD72P21854 359 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 TNFSF8P32971 234 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 GRK5P34947 590 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 SCN1BQ07699 218 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 SMN1Q16637 294 aaKnown RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 ZBTB37Q5TC79 503 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 SHEQ5VZ18 495 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 METTL2BQ6P1Q9 378 aaKnown RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 ZNF782Q6ZMW2 699 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 C1orf127Q8N9H9 656 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 ASB15Q8WXK1 588 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 ITCHQ96J02 903 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 BEX2Q9BXY8 128 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 RNF121Q9H920 327 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 AASSQ9UDR5 926 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 LOC100506127A0A0U1RQW1 187 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 B4DXG7 233 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 E5RI56 91 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 ARNTLO00327 626 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms