RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TCN2P20062 427 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 CDH3P22223 829 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 PRKG2Q13237 762 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 ITIH4Q14624 930 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 KCTD19Q17RG1 926 aaPredicted RBP17.89■□□□□ 0.45
PSPC1-202ENST00000427943 ZNF449Q6P9G9 518 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 AFTPHQ6ULP2 937 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 D2HGDHQ8N465 521 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 OR52E1Q8NGJ3 308 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 ELMO1Q92556 727 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.89■□□□□ 0.45
PSPC1-202ENST00000427943 SRMSQ9H3Y6 488 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 XKR8Q9H6D3 395 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 CASS4Q9NQ75 786 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 GEMIN8Q9NWZ8 242 aaKnown RBP17.89■□□□□ 0.45
PSPC1-202ENST00000427943 PAK5Q9P286 719 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 BTN3A3O00478 584 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 TERTO14746 1132 aaKnown RBP17.88■□□□□ 0.45
PSPC1-202ENST00000427943 FTH1P02794 183 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 NTRK1P04629 796 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 SFTPCP11686 197 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 ADRA1DP25100 572 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 RPL22P35268 128 aaKnown RBP17.88■□□□□ 0.45
PSPC1-202ENST00000427943 CCR10P46092 362 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 CD151P48509 253 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 MC1RQ01726 317 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 RPA4Q13156 261 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 KCNAB2Q13303 367 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 BOP1Q14137 746 aaKnown RBP17.88■□□□□ 0.45
PSPC1-202ENST00000427943 DEFB109BQ30KR1 87 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 PACS1Q6VY07 963 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 LRRC8AQ8IWT6 810 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 CT55Q8WUE5 264 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 TFGQ92734 400 aaPredicted RBP17.88■□□□□ 0.45
PSPC1-202ENST00000427943 RANBP9Q96S59 729 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 TLR10Q9BXR5 811 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 LHX9Q9NQ69 397 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 TCAF1Q9Y4C2 921 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 BSNQ9UPA5 3926 aa17.88■□□□□ 0.45
PSPC1-202ENST00000427943 SLC9B1P1A6NJY1 282 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 OR1I1O60431 355 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 FGGP02679 453 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 MT-ND3P03897 115 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 GSTM1P09488 218 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 CCNYL3P0C7X3 344 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 TUBB4BP68371 445 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 PRAMEP78395 509 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 CCZ1BP86790 482 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 CCZ1P86791 482 aaPredicted RBP17.87■□□□□ 0.45
PSPC1-202ENST00000427943 GSTM4Q03013 218 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 DNASE1L3Q13609 305 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 TUBB2AQ13885 445 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 SEMA3AQ14563 771 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 CCNG2Q16589 344 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 SYTL3Q4VX76 610 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 TMEM126BQ8IUX1 230 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 OR5AR1Q8NGP9 310 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 OR6P1Q8NGX9 317 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 UBE2Q2Q8WVN8 375 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 ZNF501Q96CX3 271 aaPredicted RBP17.87■□□□□ 0.45
PSPC1-202ENST00000427943 RUFY1Q96T51 708 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 TUBB2BQ9BVA1 445 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 TRIM4Q9C037 500 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 KLHL25Q9H0H3 589 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 SLC25A18Q9H1K4 315 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 ADNPQ9H2P0 1102 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 MVB12BQ9H7P6 319 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 AKIRIN1Q9H9L7 192 aaPredicted RBP17.87■□□□□ 0.45
PSPC1-202ENST00000427943 PADI1Q9ULC6 663 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 BTRCQ9Y297 605 aa17.87■□□□□ 0.45
PSPC1-202ENST00000427943 FER1L5A0AVI2 2057 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 MATN2O00339 956 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 QSOX1O00391 747 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 LIN7AO14910 233 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-202ENST00000427943 SCRG1O75711 98 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 FURINP09958 794 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 OR56A5P0C7T3 313 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 PVRP15151 417 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 ST6GAL1P15907 406 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 CXCR5P32302 372 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 KCNJ1P48048 391 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 CSE1LP55060 971 aaKnown RBP17.86■□□□□ 0.45
PSPC1-202ENST00000427943 BASP1P80723 227 aaKnown RBP17.86■□□□□ 0.45
PSPC1-202ENST00000427943 ACVR1Q04771 509 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 LAMB3Q13751 1172 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 ERV3-1Q14264 604 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 TMTC4Q5T4D3 741 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 FAM199XQ6PEV8 388 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-202ENST00000427943 ZNF662Q6ZS27 426 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 ZNF534Q76KX8 674 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 AMIGO1Q86WK6 493 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 CARFQ8N187 725 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 PPHLN1Q8NEY8 458 aaKnown RBP17.86■□□□□ 0.45
PSPC1-202ENST00000427943 OR4L1Q8NH43 312 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 TFB2MQ9H5Q4 396 aaKnown RBP17.86■□□□□ 0.45
PSPC1-202ENST00000427943 C1GALT1Q9NS00 363 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 RIMKLBQ9ULI2 386 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 ICKQ9UPZ9 632 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 ASF1AQ9Y294 204 aa17.86■□□□□ 0.45
PSPC1-202ENST00000427943 PCDHB3Q9Y5E6 796 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms