RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 LCN9Q8WX39 176 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 FERMT1Q9BQL6 677 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 PITPNM3Q9BZ71 974 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 ING2Q9H160 280 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 SRMSQ9H3Y6 488 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 PCMTD2Q9NV79 361 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 ZDHHC3Q9NYG2 299 aa12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 FEZ2Q9UHY8 353 aaPredicted RBP12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 REXO2Q9Y3B8 237 aaKnown RBP12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 PCDHGA9Q9Y5G4 932 aaKnown RBP12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 ZNF106Q9H2Y7 1883 aaKnown RBP12.68□□□□□ -0.38
DEPDC7-203ENST00000427755 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 BTNL10A8MVZ5 291 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 STK10O94804 968 aaKnown RBP12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 ST6GAL1P15907 406 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 CDH3P22223 829 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 ACRV1P26436 265 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 MC4RP32245 332 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 PTGIRP43119 386 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 RWDD2BP57060 319 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 GSDMDP57764 484 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 PRKAA1Q13131 559 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 KRT33BQ14525 404 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 GPR33Q49SQ1 333 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 FAM69BQ5VUD6 431 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 FAM198BQ6UWH4 519 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 SERPINA9Q86WD7 417 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 PIANPQ8IYJ0 282 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 ENDOVQ8N8Q3 282 aaKnown RBP12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 OR52E1Q8NGJ3 308 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 CPT1BQ92523 772 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 CALR3Q96L12 384 aaKnown RBP12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 PPP1R2P1Q96PQ5 205 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 PSMG3-AS1Q96PY0 264 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 FERD3LQ96RJ6 166 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 LACRTQ9GZZ8 138 aa12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 TFB2MQ9H5Q4 396 aaKnown RBP12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 LUC7LQ9NQ29 371 aaKnown RBP12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 EPN1Q9Y6I3 576 aaPredicted RBP12.67□□□□□ -0.38
DEPDC7-203ENST00000427755 GSAPA4D1B5 854 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 GRID2IPA4D2P6 1211 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 TMEM150CB9EJG8 249 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 IFRD1O00458 451 aaPredicted RBP12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 CEACAM4O75871 244 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 TJP3O95049 919 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 METTL18O95568 372 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 KLK3P07288 261 aaPredicted RBP12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 PSMA3P25788 255 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 PREPP48147 710 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 CD151P48509 253 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 LMAN1P49257 510 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 CCL11P51671 97 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 RPA4Q13156 261 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 BOP1Q14137 746 aaKnown RBP12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 RAD9BQ6WBX8 426 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 ADGRF3Q8IZF5 1079 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 CLDN19Q8N6F1 224 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 PHC3Q8NDX5 983 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 TRAPPC9Q96Q05 1148 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 PANX2Q96RD6 677 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 SLC25A23Q9BV35 468 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 NLNQ9BYT8 704 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 XKR8Q9H6D3 395 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 MVB12BQ9H7P6 319 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 FANCEQ9HB96 536 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 SYTL2Q9HCH5 934 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 ACSS2Q9NR19 701 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 NLE1Q9NVX2 485 aaPredicted RBP12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 TCFL5Q9UL49 500 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 NAV2Q8IVL1 2488 aa12.66□□□□□ -0.38
DEPDC7-203ENST00000427755 DOPEY2Q9Y3R5 2298 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 COL12A1Q99715 3063 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 H3BMH7 237 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 SORBS2O94875 1100 aaKnown RBP12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 GP1BBP13224 206 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 PVRP15151 417 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 TPH1P17752 444 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 UQCRFS1P47985 274 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 PGDP52209 483 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 ITGA1P56199 1179 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 DBN1Q16643 649 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 PARP6Q2NL67 630 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 PTCHD3Q3KNS1 767 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 NADK2Q4G0N4 442 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 ZRANB3Q5FWF4 1079 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 ZNF385CQ66K41 422 aaPredicted RBP12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 CDHR3Q6ZTQ4 885 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 ATCAYQ86WG3 371 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 AMIGO1Q86WK6 493 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 SYTL1Q8IYJ3 562 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 ZBTB2Q8N680 514 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 FAM71DQ8N9W8 422 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 TFGQ92734 400 aaPredicted RBP12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 CLIP3Q96DZ5 547 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 CDKN2AIPNLQ96HQ2 116 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 HGH1Q9BTY7 390 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 KLHL25Q9H0H3 589 aa12.65□□□□□ -0.38
DEPDC7-203ENST00000427755 ACTR5Q9H9F9 607 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms