RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 CCKBRP32239 447 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 PPARGP37231 505 aaPredicted RBP15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 PREPP48147 710 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 CSE1LP55060 971 aaKnown RBP15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 EIF3BP55884 814 aaKnown RBP15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 MPP1Q00013 466 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 CBLBQ13191 982 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 LRRC69Q6ZNQ3 347 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 SDCCAG8Q86SQ7 713 aaPredicted RBP15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 CCDC25Q86WR0 208 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 HM13Q8TCT9 377 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 NCSTNQ92542 709 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 FGF11Q92914 225 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 SH3GL2Q99962 352 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 NAT9Q9BTE0 207 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 TBC1D10AQ9BXI6 508 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 WWP1Q9H0M0 922 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 PISDQ9UG56 409 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 LOXL2Q9Y4K0 774 aa15.33■□□□□ 0.05
CLK3P2-201ENST00000427566 C17orf113A0A1B0GUU1 675 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 A8MU76 341 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 NDC80O14777 642 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 PLD2O14939 933 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 POLR3GO15318 223 aaPredicted RBP15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 KCNJ13O60928 360 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 PIAS1O75925 651 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 HAUS5O94927 633 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 HOXB3P14651 431 aaPredicted RBP15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 CCR7P32248 378 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 MAPK10P53779 464 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 UBE2IP63279 158 aaKnown RBP15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 GPLD1P80108 840 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 CAV1Q03135 178 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 AGAP9Q5VTM2 703 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 DUS1LQ6P1R4 473 aaKnown RBP15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 LRIG3Q6UXM1 1119 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 WASH2PQ6VEQ5 465 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 AVL9Q8NBF6 648 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 ELMO1Q92556 727 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 FAM136AQ96C01 138 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 CERS2Q96G23 380 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 CCDC74BQ96LY2 380 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 RMDN2Q96LZ7 410 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 ZNF578Q96N58 590 aaPredicted RBP15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 INSM2Q96T92 566 aaPredicted RBP15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 TCF12Q99081 682 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 FMO2Q99518 471 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 CMKLR1Q99788 373 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 WASH6PQ9NQA3 447 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 THSD1Q9NS62 852 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 AKAP7Q9P0M2 348 aaPredicted RBP15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 TMEM9Q9P0T7 183 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 GALPQ9UBC7 116 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 KLHL3Q9UH77 587 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 FBXO5Q9UKT4 447 aa15.33■□□□□ 0.04
CLK3P2-201ENST00000427566 URB1O60287 2271 aaKnown RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 USP24Q9UPU5 2620 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 IGHV5-10-1A0A0J9YXX1 117 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 RRP8O43159 456 aaKnown RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 NIPSNAP2O75323 286 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 XRCC1P18887 633 aaPredicted RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 ITIH1P19827 911 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 RPS3P23396 243 aaKnown RBP eCLIP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 GABRB3P28472 473 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 SSTR1P30872 391 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 CSF2RBP32927 897 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 ABCG1P45844 678 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 ZFP36L1Q07352 338 aaKnown RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 EIF3IQ13347 325 aaKnown RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 BOP1Q14137 746 aaKnown RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 TERF2Q15554 542 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 RPE65Q16518 533 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 PTRHD1Q6GMV3 140 aaKnown RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 ZNF549Q6P9A3 640 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 CNSTQ6PJW8 725 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 ZNF574Q6ZN55 896 aaPredicted RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 VRK3Q8IV63 474 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 SLITRK4Q8IW52 837 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 PYROXD1Q8WU10 500 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 C9orf72Q96LT7 481 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 SLC46A1Q96NT5 459 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 OR52A5Q9H2C5 316 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 PPANQ9NQ55 473 aaKnown RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 IMP3Q9NV31 184 aaKnown RBP15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 PCDHGA8Q9Y5G5 932 aa15.32■□□□□ 0.04
CLK3P2-201ENST00000427566 ACACAQ13085 2346 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 WDFY3Q8IZQ1 3526 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 ASPMQ8IZT6 3477 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 SLC5A10A0PJK1 596 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 QSOX1O00391 747 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 EIF3HO15372 352 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 FTH1P02794 183 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 TYRP1P17643 537 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 AMD1P17707 334 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 LIMK2P53671 638 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 PCBP4P57723 403 aaKnown RBP15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 GPX6P59796 221 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 CFHR1Q03591 330 aa15.31■□□□□ 0.04
CLK3P2-201ENST00000427566 C16orf72Q14CZ0 275 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms