RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CD300CQ08708 224 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 ZNF648Q5T619 568 aaPredicted RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 HEATR4Q86WZ0 1026 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 DNAJC5GQ8N7S2 189 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP42-203ENST00000426246 ARMC5Q96C12 935 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 DPH2Q9BQC3 489 aaPredicted RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 PRDM16Q9HAZ2 1276 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 OPTCQ9UBM4 332 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 TMCO1Q9UM00 188 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 FXYD1O00168 92 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 OPN1SWP03999 348 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 MATN1P21941 496 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 MAGEA11P43364 429 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 EIF2B2P49770 351 aaKnown RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 BLOC1S3Q6QNY0 202 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 ANKS3Q6ZW76 656 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 CCDC117Q8IWD4 279 aaPredicted RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 ADGRG2Q8IZP9 1017 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 C8orf59Q8N0T1 100 aaPredicted RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 SFRP1Q8N474 314 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 SNX19Q92543 992 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 HTRA1Q92743 480 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 DPF3Q92784 378 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 UBE2FQ969M7 185 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 ELOVL6Q9H5J4 265 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 C2orf78A6NCI8 922 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 HLA-DPA1P20036 260 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 GJA8P48165 433 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 CDK9P50750 372 aaKnown RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 PHKG1Q16816 387 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 LRRC26Q2I0M4 334 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 TMEM236Q5W0B7 351 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 CRTC3Q6UUV7 619 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 UTP15Q8TED0 518 aaKnown RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 FOXJ1Q92949 421 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 ISL2Q96A47 359 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 RHNO1Q9BSD3 238 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 MRPL9Q9BYD2 267 aaKnown RBP13.14□□□□□ -0.31
USP42-203ENST00000426246 COMMD8Q9NX08 183 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 SH3BP4Q9P0V3 963 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 ACTR3BQ9P1U1 418 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 SCML2Q9UQR0 700 aa13.14□□□□□ -0.31
USP42-203ENST00000426246 PNMA8CA0A1B0GUJ8 204 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 TCRBV3S1A0A5B6 114 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 HOXA2O43364 376 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 SERPINA1P01009 418 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 C1QCP02747 245 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 THRBP10828 461 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 TGFBR1P36897 503 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 NUDT6P53370 316 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 DNAJB13P59910 316 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 CTBSQ01459 385 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 GTF2H2Q13888 395 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 PPP4R4Q6NUP7 873 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 GTF2H2CQ6P1K8 395 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 RFLNAQ6ZTI6 216 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 SERPINA9Q86WD7 417 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 CARM1Q86X55 608 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 ERI1Q8IV48 349 aaKnown RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 WBP2Q969T9 261 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 TMEM125Q96AQ2 219 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 TRMOQ9BU70 441 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 C6orf62Q9GZU0 229 aaPredicted RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 CHCHD3Q9NX63 227 aaKnown RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 NYNRINQ9P2P1 1898 aaKnown RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 OR6C75A6NL08 312 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 OR2AG2A6NM03 316 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 H0Y858 1186 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 H3BMQ9 156 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 M0R129 80 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 SAP18O00422 153 aaKnown RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 ANXA6P08133 673 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 TNFRSF1BP20333 461 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 HK3P52790 923 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 SMN1Q16637 294 aaKnown RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 NADSYN1Q6IA69 706 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 COG8Q96MW5 612 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 ATOH8Q96SQ7 321 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 ABCB10Q9NRK6 738 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 EIF3LQ9Y262 564 aaKnown RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 DOCK4Q8N1I0 1966 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 MTMR11A4FU01 709 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 RECQL5O94762 991 aaPredicted RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 INMTO95050 263 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 VBP1P61758 197 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 GPR17Q13304 367 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 BEND7Q8N7W2 519 aaPredicted RBP13.13□□□□□ -0.31
USP42-203ENST00000426246 TNIP2Q8NFZ5 429 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 PSMA8Q8TAA3 256 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 SLC47A1Q96FL8 570 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 CGREF1Q99674 301 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 KLHL25Q9H0H3 589 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 CD300AQ9UGN4 299 aa13.13□□□□□ -0.31
USP42-203ENST00000426246 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 ANKRD66B4E2M5 251 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 K7EPI3 171 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms