RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 GPC4O75487 556 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 AHSGP02765 367 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 CBLBQ13191 982 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 FRG1Q14331 258 aaKnown RBP15.36■□□□□ 0.05
BRAT1-202ENST00000421712 PLEKHS1Q5SXH7 462 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 ARMC6Q6NXE6 501 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 TMEM71Q6P5X7 295 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 KLHL35Q6PF15 583 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 CEP128Q6ZU80 1094 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 VRK3Q8IV63 474 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 CNTN4Q8IWV2 1026 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 IFT20Q8IY31 132 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 SLC22A15Q8IZD6 547 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 ZBTB2Q8N680 514 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 ACVR1CQ8NER5 493 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 OR4E2Q8NGC2 313 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 OR4D9Q8NGE8 314 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 CDKL2Q92772 493 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 GRAMD1AQ96CP6 724 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 FOPNLQ96NB1 174 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 NDNQ99608 321 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 HGH1Q9BTY7 390 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 FAM129AQ9BZQ8 928 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 PHACTR1Q9C0D0 580 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 TRIT1Q9H3H1 467 aaKnown RBP15.36■□□□□ 0.05
BRAT1-202ENST00000421712 KIR3DX1Q9H7L2 352 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 ZDHHC18Q9NUE0 388 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 MOCS1Q9NZB8 636 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 AKAP7Q9P0M2 348 aaPredicted RBP15.36■□□□□ 0.05
BRAT1-202ENST00000421712 SLC24A2Q9UI40 661 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 VPS26AO75436 327 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 SLCO2B1O94956 709 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 ACADLP28330 430 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 CSF2RBP32927 897 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 DEKP35659 375 aaKnown RBP15.35■□□□□ 0.05
BRAT1-202ENST00000421712 ABCG1P45844 678 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 CFHR1Q03591 330 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 SQSTM1Q13501 440 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 TTLL9Q3SXZ7 439 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 C3orf38Q5JPI3 329 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 TEX35Q5T0J7 233 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 IRGCQ6NXR0 463 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 ZNF549Q6P9A3 640 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 WDR74Q6RFH5 385 aaPredicted RBP15.35■□□□□ 0.05
BRAT1-202ENST00000421712 ZNF574Q6ZN55 896 aaPredicted RBP15.35■□□□□ 0.05
BRAT1-202ENST00000421712 TMPRSS9Q7Z410 1059 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 STRA8Q7Z7C7 330 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 PLXDC1Q8IUK5 500 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 GPATCH11Q8N954 259 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 SIDT2Q8NBJ9 832 aaKnown RBP15.35■□□□□ 0.05
BRAT1-202ENST00000421712 OR5AR1Q8NGP9 310 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 LCN9Q8WX39 176 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 CCDC74BQ96LY2 380 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 TGM7Q96PF1 710 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 AARSD1Q9BTE6 412 aaKnown RBP15.35■□□□□ 0.05
BRAT1-202ENST00000421712 TSPYL1Q9H0U9 437 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 TMEM9Q9P0T7 183 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 TXNDC16Q9P2K2 825 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 GALPQ9UBC7 116 aa15.35■□□□□ 0.05
BRAT1-202ENST00000421712 IGHV5-10-1A0A0J9YXX1 117 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 CAPN5O15484 640 aaPredicted RBP15.34■□□□□ 0.05
BRAT1-202ENST00000421712 KDM1AO60341 852 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 RPN2P04844 631 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 MPOP05164 745 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 GSTA2P09210 222 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 GABRB3P28472 473 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 CCKBRP32239 447 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 LIMK2P53671 638 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 ZFP36L1Q07352 338 aaKnown RBP15.34■□□□□ 0.05
BRAT1-202ENST00000421712 UGT3A1Q6NUS8 523 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 TTC23LQ6PF05 361 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 OOSP2Q86WS3 158 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 CTAGE3PQ8IX95 158 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 TBC1D21Q8IYX1 336 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 LRRN4CLQ8ND94 238 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 RCBTB1Q8NDN9 531 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 RSC1A1Q92681 617 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 KCNJ9Q92806 393 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 INPP5DQ92835 1189 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 FMO2Q99518 471 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 GPR21Q99679 349 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 CMKLR1Q99788 373 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 SRMSQ9H3Y6 488 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 L2HGDHQ9H9P8 463 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 HRASLS2Q9NWW9 162 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 NSMCE4AQ9NXX6 385 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 POLG2Q9UHN1 485 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 TRMT6Q9UJA5 497 aaKnown RBP15.34■□□□□ 0.05
BRAT1-202ENST00000421712 SATB2Q9UPW6 733 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 CDYLQ9Y232 598 aa15.34■□□□□ 0.05
BRAT1-202ENST00000421712 CCDC187A0A096LP49 1063 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 TCRBV9S1A1TA0A576 114 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 OR6C74A6NCV1 312 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 RASSF9O75901 435 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 PIAS1O75925 651 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 SAT1P21673 171 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 CLCN7P51798 805 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 PDX1P52945 283 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 GPX6P59796 221 aa15.33■□□□□ 0.04
BRAT1-202ENST00000421712 GABREP78334 506 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms