RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SERPINB12Q96P63 405 aa19.77■□□□□ 0.76
GTF3A-202ENST00000419181 UBL7Q96S82 380 aaPredicted RBP19.77■□□□□ 0.76
GTF3A-202ENST00000419181 NAPGQ99747 312 aaPredicted RBP19.77■□□□□ 0.76
GTF3A-202ENST00000419181 DDX47Q9H0S4 455 aaKnown RBP19.77■□□□□ 0.76
GTF3A-202ENST00000419181 P2RY12Q9H244 342 aa19.77■□□□□ 0.76
GTF3A-202ENST00000419181 TFB2MQ9H5Q4 396 aaKnown RBP19.77■□□□□ 0.76
GTF3A-202ENST00000419181 IGHV5-51A0A0C4DH38 117 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 TEX51A0A1B0GUA7 166 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 TLCD2A6NGC4 264 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 GOLGA8MH3BSY2 632 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 CCR7P32248 378 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 ARCN1P48444 511 aaKnown RBP19.76■□□□□ 0.75
GTF3A-202ENST00000419181 SRSF6Q13247 344 aaKnown RBP19.76■□□□□ 0.75
GTF3A-202ENST00000419181 CREG2Q8IUH2 290 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 OR4E2Q8NGC2 313 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 OR52E1Q8NGJ3 308 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 LKAAEAR1Q8TD35 194 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 LCN9Q8WX39 176 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 NKD1Q969G9 470 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 MAP3K3Q99759 626 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 CARD6Q9BX69 1037 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 TSSK1BQ9BXA7 367 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 PCYOX1Q9UHG3 505 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 PILRAQ9UKJ1 303 aa19.76■□□□□ 0.75
GTF3A-202ENST00000419181 FAM237BA0A1B0GVD1 139 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 IQCF5A8MTL0 148 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 FANCGO15287 622 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 RPS3P23396 243 aaKnown RBP eCLIP19.75■□□□□ 0.75
GTF3A-202ENST00000419181 FOXM1Q08050 763 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 PPP1R7Q15435 360 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 TYSND1Q2T9J0 566 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 MRNIPQ6NTE8 343 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 CASC4Q6P4E1 433 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 VASH2Q86V25 355 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 KMT5CQ86Y97 462 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 PPIL6Q8IXY8 311 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 CARFQ8N187 725 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 CAPZA3Q96KX2 299 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 BBC3Q96PG8 261 aaPredicted RBP19.75■□□□□ 0.75
GTF3A-202ENST00000419181 OR6C1Q96RD1 312 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 TRIM56Q9BRZ2 755 aaKnown RBP19.75■□□□□ 0.75
GTF3A-202ENST00000419181 HGH1Q9BTY7 390 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 SRMSQ9H3Y6 488 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 SAMD15Q9P1V8 674 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 POMT2Q9UKY4 750 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 CDYLQ9Y232 598 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 ASF1AQ9Y294 204 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 TMEM184BQ9Y519 407 aaPredicted RBP19.75■□□□□ 0.75
GTF3A-202ENST00000419181 SAR1BQ9Y6B6 198 aa19.75■□□□□ 0.75
GTF3A-202ENST00000419181 MAGEB16A2A368 324 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 SDR42E2A6NKP2 422 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 GOLGA8KD6RF30 607 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 GOLGA8TH3BQL2 631 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 MATN2O00339 956 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 NDUFS3O75489 264 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 ITGB6P18564 788 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 PAMP19021 973 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 POLR2CP19387 275 aaPredicted RBP19.74■□□□□ 0.75
GTF3A-202ENST00000419181 ATP1A2P50993 1020 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 KPNA2P52292 529 aaKnown RBP19.74■□□□□ 0.75
GTF3A-202ENST00000419181 PRKG2Q13237 762 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 PTK6Q13882 451 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 IL11RAQ14626 422 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 MANEAQ5SRI9 462 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 RNASEH2BQ5TBB1 312 aaKnown RBP19.74■□□□□ 0.75
GTF3A-202ENST00000419181 ARMC6Q6NXE6 501 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 TMEM135Q86UB9 458 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 LRRC6Q86X45 466 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 TBC1D21Q8IYX1 336 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 SLC22A15Q8IZD6 547 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 KRT222Q8N1A0 295 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 AGGF1Q8N302 714 aaeCLIP19.74■□□□□ 0.757e-8■■□□□ 11.5
GTF3A-202ENST00000419181 OTUD6BQ8N6M0 293 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 OR5AR1Q8NGP9 310 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 NRTNQ99748 197 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 GNPTGQ9UJJ9 305 aa19.74■□□□□ 0.75
GTF3A-202ENST00000419181 ATMQ13315 3056 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 UBA6A0AVT1 1052 aaPredicted RBP19.73■□□□□ 0.75
GTF3A-202ENST00000419181 CTAGE9A4FU28 777 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 BTN3A3O00478 584 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 RAD1O60671 282 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 GPC4O75487 556 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 STK17BO94768 372 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 DLGAP3O95886 979 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 FGF5P12034 268 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 AOAHP28039 575 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 PTGIRP43119 386 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 CSE1LP55060 971 aaKnown RBP19.73■□□□□ 0.75
GTF3A-202ENST00000419181 HSPA14Q0VDF9 509 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 PRKAA1Q13131 559 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 ANKRD20A4Q4UJ75 823 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 RNF187Q5TA31 235 aaPredicted RBP19.73■□□□□ 0.75
GTF3A-202ENST00000419181 PTRHD1Q6GMV3 140 aaKnown RBP19.73■□□□□ 0.75
GTF3A-202ENST00000419181 SDCCAG8Q86SQ7 713 aaPredicted RBP19.73■□□□□ 0.75
GTF3A-202ENST00000419181 AMIGO1Q86WK6 493 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 VRK3Q8IV63 474 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 OR5K2Q8NHB8 316 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 ASZ1Q8WWH4 475 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 LPGAT1Q92604 370 aa19.73■□□□□ 0.75
GTF3A-202ENST00000419181 PANX3Q96QZ0 392 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms