RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 NAP1L1P55209 391 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 HAND2P61296 217 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 SEC61A1P61619 476 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 TIMM10P62072 90 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GNGT1P63211 74 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 TUBA1BP68363 451 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 ZBED6P86452 979 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 UBXN1Q04323 297 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 ACTN3Q08043 901 aaPredicted RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 NIPAL4Q0D2K0 466 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GAGE1Q13065 139 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GAGE4Q13068 117 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 MYBPHQ13203 477 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CRYMQ14894 314 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 WTAPQ15007 396 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 KRT31Q15323 416 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 SPA17Q15506 151 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CALCRLQ16602 461 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CTF1Q16619 201 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CFAP221Q4G0U5 840 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 ATP13A5Q4VNC0 1218 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 SPDYCQ5MJ68 293 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GPATCH4Q5T3I0 446 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 NADSYN1Q6IA69 706 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 C8orf74Q6P047 294 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 KCTD18Q6PI47 426 aaPredicted RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 SLC36A4Q6YBV0 504 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CCDC121Q6ZUS5 278 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CREB3L2Q70SY1 520 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 IKBIPQ70UQ0 350 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CHST3Q7LGC8 479 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CROCCP2Q86T23 111 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 PGBD5Q8N414 524 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 RNF10Q8N5U6 811 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 SGCDQ92629 289 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 RND1Q92730 232 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 USP6NLQ92738 828 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 IGSF8Q969P0 613 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 ARHGEF26Q96DR7 871 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 RRNAD1Q96FB5 475 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 PAGE5Q96GU1 130 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 DHTKD1Q96HY7 919 aaPredicted RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 FIZ1Q96SL8 496 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CSF3RQ99062 836 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 SLF1Q9BQI6 1058 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CHCHD6Q9BRQ6 235 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 PCGF1Q9BSM1 259 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 MOV10L1Q9BXT6 1211 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 EDEM3Q9BZQ6 932 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 KCNN2Q9H2S1 579 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 VCPKMTQ9H867 229 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 KAT14Q9H8E8 782 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 RANGRFQ9HD47 186 aaPredicted RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 NOX4Q9NPH5 578 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 EIF2B3Q9NR50 452 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 BATF3Q9NR55 127 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 BLOC1S4Q9NUP1 217 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 EXOC1Q9NV70 894 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 HCFC1R1Q9NWW0 138 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 CNOT8Q9UFF9 292 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 SWAP70Q9UH65 585 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 TINAGQ9UJW2 476 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 SNX12Q9UMY4 172 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 LYVE1Q9Y5Y7 322 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 NFS1Q9Y697 457 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GRIN2DO15399 1336 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 ATP8B3O60423 1300 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 C1orf167Q5SNV9 1468 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 LAMB1P07942 1786 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 COL18A1P39060 1754 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 ATAD5Q96QE3 1844 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TAF1P21675 1872 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TNS3Q68CZ2 1445 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 IGLV5-37A0A075B6J1 123 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TTC26A0AVF1 554 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 MYO1GB0I1T2 1018 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 BTBD18B2RXH4 712 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 AP3D1O14617 1153 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SLC28A2O43868 658 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TIPRLO75663 272 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ATP1A1P05023 1023 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 PCCAP05165 728 aaPredicted RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 GSTA1P08263 222 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 GHRP10912 638 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 SRCP12931 536 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 RARGP13631 454 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 PLA2G2AP14555 144 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 GCFC2P16383 781 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 TRIM21P19474 475 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 NR1D1P20393 614 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ANXA13P27216 316 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 CALML3P27482 149 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TKTP29401 623 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 HSPA9P38646 679 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 CCT6AP40227 531 aaKnown RBP2.63□□□□□ -1.99
VPS41-206ENST00000418457 PIK3CAP42336 1068 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 TDO2P48775 406 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 FNTAP49354 379 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 PDLIM4P50479 330 aa2.63□□□□□ -1.99
VPS41-206ENST00000418457 ART1P52961 327 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms