RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TGDSO95455 350 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PIM1P11309 404 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 EFNA1P20827 205 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 LMO2P25791 158 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 HSD11B1P28845 292 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 KHKP50053 298 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PNLIPRP1P54315 467 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 IL18R1Q13478 541 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PDGFRLQ15198 375 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PYROXD2Q8N2H3 581 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 C11orf65Q8NCR3 313 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 S100ZQ8WXG8 99 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 NSMCE3Q96MG7 304 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 ZNF570Q96NI8 536 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 NIFKQ9BYG3 293 aaKnown RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 CLK4Q9HAZ1 481 aaKnown RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 H0YGN5 161 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 NDUFS4O43181 175 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 COL6A1P12109 1028 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 ACP5P13686 325 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PER3P56645 1201 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 CLCQ05315 142 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 LIPEQ05469 1076 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 CCINQ13939 588 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 LRRC55Q6ZSA7 311 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 C1orf127Q8N9H9 656 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 WFIKKN2Q8TEU8 576 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 RAB11FIP5Q9BXF6 653 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 TCAF1Q9Y4C2 921 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 SCDO00767 359 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 AREL1O15033 823 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PDPK1O15530 556 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PI15O43692 258 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 AOC2O75106 756 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PRKCGP05129 697 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 HOXB6P17509 224 aaKnown RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 NMBRP28336 390 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 FOLH1Q04609 750 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 NOMO1Q15155 1222 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 CCSAPQ6IQ19 270 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 DENND5AQ6IQ26 1287 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 DNAJB7Q7Z6W7 309 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 IQCHQ86VS3 1027 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 SLC35G5Q96KT7 338 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 INPP4AQ96PE3 977 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 MTERF1Q99551 399 aaKnown RBP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 LRRC4CQ9HCJ2 640 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 CACNG4Q9UBN1 327 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 SERPINA3P01011 423 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 LCN1P1Q5VSP4 162 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 TMEM156Q8N614 296 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 SIPA1Q96FS4 1042 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 KREMEN1Q96MU8 473 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PNPLA3Q9NST1 481 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 HMGXB4Q9UGU5 601 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 PLLPQ9Y342 182 aa11.05□□□□□ -0.64
PTCH1-205ENST00000418258 A0A1W2PPM1 405 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 PSMA1P25786 263 aaKnown RBP11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TNFRSF8P28908 595 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 PTDSS1P48651 473 aaKnown RBP11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TXNL4AP83876 142 aaKnown RBP11.04□□□□□ -0.64
PTCH1-205ENST00000418258 DCAKDQ8WVC6 231 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 PNPLA8Q9NP80 782 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 IL1RAPQ9NPH3 570 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 C15orf41Q9Y2V0 281 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ROBO3Q96MS0 1386 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-205ENST00000418258 UNC5CO95185 931 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 S100A9P06702 114 aaKnown RBP11.04□□□□□ -0.64
PTCH1-205ENST00000418258 FCHO2Q0JRZ9 810 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TTMPQ5BVD1 217 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 PPM1JQ5JR12 505 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 CPNE9Q8IYJ1 553 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 PLD5Q8N7P1 536 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ARMC5Q96C12 935 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 RNPEPL1Q9HAU8 725 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TLR9Q9NR96 1032 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 FBXW11Q9UKB1 542 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 MAFBQ9Y5Q3 323 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-205ENST00000418258 PEAK1Q9H792 1746 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TFECO14948 347 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TOR1AIP1Q5JTV8 583 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ZNF280BQ86YH2 543 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TTLQ8NG68 377 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 LMX1AQ8TE12 382 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ABCB9Q9NP78 766 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 SLC17A7Q9P2U7 560 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ELOA3DA6NLF2 546 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-205ENST00000418258 IL12AP29459 219 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ARL2P36404 184 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TSPAN5P62079 268 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ABATP80404 500 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ELOA3BQ3SY89 546 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 IRF2BP2Q7Z5L9 587 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 TAC4Q86UU9 113 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 UBE2J2Q8N2K1 259 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 ELOA3Q8NG57 546 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 SCAMP5Q8TAC9 235 aa11.04□□□□□ -0.64
PTCH1-205ENST00000418258 GPATCH1Q9BRR8 931 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms