RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MARVELD3Q96A59 401 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM149B1Q96BN6 582 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 TMEM209Q96SK2 561 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ROGDIQ9GZN7 287 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ARIH1Q9Y4X5 557 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 NEUROG3Q9Y4Z2 214 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 A0A1B0GTL3 188 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 TEX51A0A1B0GUA7 166 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 OR5K3A6NET4 321 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 MT-CYBP00156 380 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 HNF4AP41235 474 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 PIK3CBP42338 1070 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 CDKN2DP55273 166 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ERVK-8P63133 956 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 AAK1Q2M2I8 961 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 XKR7Q5GH72 579 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 AHSA2Q719I0 299 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 LRRC8DQ7L1W4 858 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 LIX1LQ8IVB5 337 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 TCAIMQ8N3R3 496 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF548Q8NEK5 533 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 TOR1AIP2Q8NFQ8 470 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 IPMKQ8NFU5 416 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF668Q96K58 619 aaPredicted RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 RIBC2Q9H4K1 309 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 PIGVQ9NUD9 493 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ERVK13-1Q9NX77 482 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 U3KQV3 271 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ARNTLO00327 626 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 GSTA4O15217 222 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 CPNE3O75131 537 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 DNTTP04053 509 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 RPLP0P05388 317 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 CYP4B1P13584 511 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 MTHFD2P13995 350 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ICAM3P32942 547 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ADRA1BP35368 520 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 HCAR3P49019 387 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 LIMK1P53667 647 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 RAD51Q06609 339 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 LCP2Q13094 533 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 PLA2G4EQ3MJ16 856 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM205BPQ63HN1 556 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC46A3Q7Z3Q1 461 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 FBXL6Q8N531 539 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 OR52K2Q8NGK3 314 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 FICDQ9BVA6 458 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 PRKD2Q9BZL6 878 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 MAGIXQ9H6Y5 334 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 MINDY3Q9H8M7 445 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 GMPPBQ9Y5P6 360 aa7.89□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF236Q9UL36 1845 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 MEN1O00255 615 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 MTRF1O75570 445 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 CD1DP15813 335 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ADORA2BP29275 332 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ERP29P30040 261 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 GRK5P34947 590 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 MBTD1Q05BQ5 628 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PFKFB4Q16877 469 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PROX2Q3B8N5 592 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ATP6AP1LQ52LC2 224 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 SHQ1Q6PI26 577 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ZMIZ2Q8NF64 920 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 NDRG1Q92597 394 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PEX13Q92968 403 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 CDCA5Q96FF9 252 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC9A7Q96T83 725 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ACOX2Q99424 681 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC30A2Q9BRI3 323 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 GABARAPL1Q9H0R8 117 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 DPEP3Q9H4B8 488 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 C12orf4Q9NQ89 552 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PRDM8Q9NQV8 689 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 NUP50Q9UKX7 468 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 NDRG4Q9ULP0 352 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 IGKV6-21A0A0C4DH24 114 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 SNTNA6NMZ2 147 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 NOS1APO75052 506 aaPredicted RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 SEC22BO75396 215 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 TSPAN9O75954 239 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 ANXA9O76027 345 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 IQCF3P0C7M6 154 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 CA5AP35218 305 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 CTAG1AP78358 180 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PWP1Q13610 501 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 TBCEQ15813 527 aaPredicted RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PCSK7Q16549 785 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 TIGD6Q17RP2 521 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM160B1Q5W0V3 765 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 EFL1Q7Z2Z2 1120 aaKnown RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 GALNT7Q86SF2 657 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PIM3Q86V86 326 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 TSPYL5Q86VY4 417 aaPredicted RBP7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 OR8H2Q8N162 312 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 PAF1Q8N7H5 531 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 FLCNQ8NFG4 579 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 WNT8BQ93098 351 aa7.88□□□□□ -1.15
HMGXB4-202ENST00000418170 OMA1Q96E52 524 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms