RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 LAMA2P24043 3122 aaKnown RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 GOLGA6L7A0A1B0GV03 622 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 E9PAM4 449 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 F5H5T6 163 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 H3BQ06 376 aaPredicted RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 PSMD9O00233 223 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 PGRMC1O00264 195 aaKnown RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 MPPED1O15442 326 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 ZSCAN9O15535 394 aaPredicted RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 TJP3O95049 919 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 PRAMEF12O95522 483 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 FESP07332 822 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 KRT10P13645 584 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 GOT1P17174 413 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 MAKP20794 623 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 KCNA5P22460 613 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 HOXC13P31276 330 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 PAFAH1B1P43034 410 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 ALDH18A1P54886 795 aaKnown RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 TPI1P60174 286 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 FHL3Q13643 280 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 DPYSQ14117 519 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 TFDP2Q14188 446 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 ZNF77Q15935 545 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 WHAMMP3Q1A5X7 153 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 C5orf22Q49AR2 442 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 FAM133BQ5BKY9 247 aaKnown RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 TFDP3Q5H9I0 405 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 NADSYN1Q6IA69 706 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 RWDD4Q6NW29 188 aaKnown RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 FBXL22Q6P050 247 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 RFWD3Q6PCD5 774 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 LRRC31Q6UY01 552 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 Q6ZNX1 250 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 RFX8Q6ZV50 586 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 BBS12Q6ZW61 710 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 CHSY1Q86X52 802 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 ZNF354CQ86Y25 554 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 RFX6Q8HWS3 928 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 FAM217AQ8IXS0 508 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 ZNF683Q8IZ20 524 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 LGI2Q8N0V4 545 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 FSTL5Q8N475 847 aaPredicted RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 PQLC3Q8N755 202 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 C11orf44Q8N8P7 122 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 MAIP1Q8WWC4 291 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 XAGE5Q8WWM1 108 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 PPM1EQ8WY54 764 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 TBC1D31Q96DN5 1066 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 RPRD1AQ96P16 312 aaPredicted RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 CSPG4P5Q96PW8 444 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 RNF157Q96PX1 679 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 MYADMQ96S97 322 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 TMEM120AQ9BXJ8 343 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 POMKQ9H5K3 350 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 KIF9Q9HAQ2 790 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 TRPV4Q9HBA0 871 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 SMARCAL1Q9NZC9 954 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 TBC1D14Q9P2M4 693 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 RIMKLBQ9ULI2 386 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 VANGL2Q9ULK5 521 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 SLC27A6Q9Y2P4 619 aa5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 ZFP37Q9Y6Q3 630 aaPredicted RBP5.93□□□□□ -1.46
NIFKP3-201ENST00000417799 OBSL1O75147 1896 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 BRWD1Q9NSI6 2320 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 DENND4CQ5VZ89 1909 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 IGLV3-10A0A075B6K4 115 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 HEPACAM2A8MVW5 462 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 FCHO1O14526 889 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 TRDMT1O14717 391 aaKnown RBP5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 SLC9A3R1O14745 358 aaPredicted RBP5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 PCDH17O14917 1159 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 MBTPS2O43462 519 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 TSPAN3O60637 253 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 CST8O60676 142 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 CNTN5O94779 1100 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 NXPH3O95157 252 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 ONECUT2O95948 504 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 ITGA2BP08514 1039 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 IL6RP08887 468 aaPredicted RBP5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 HKR1P10072 659 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 LAMP2P13473 410 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 ZFXP17010 805 aaPredicted RBP5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 ERCC2P18074 760 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 EPHB2P29323 1055 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 RENBPP51606 427 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 POLE2P56282 527 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 CKAP4Q07065 602 aaKnown RBP5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 BMPR2Q13873 1038 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 CLCA4Q14CN2 919 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 LEXMQ3ZCV2 418 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 RABGAP1LQ5R372 815 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 KAZNQ674X7 775 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 KIAA0895LQ68EN5 471 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 TANGO2Q6ICL3 276 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 BBS7Q8IWZ6 715 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 CPXM2Q8N436 756 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 SLC44A3Q8N4M1 653 aa5.92□□□□□ -1.46
NIFKP3-201ENST00000417799 PLD5Q8N7P1 536 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms