RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 GRNP28799 593 aaKnown RBP17.56■□□□□ 0.4
VCP-202ENST00000417448 DCDC1P59894 354 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 XIAPP98170 497 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 DNASE1L3Q13609 305 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 JMJD6Q6NYC1 403 aaPredicted RBP17.56■□□□□ 0.4
VCP-202ENST00000417448 C4orf22Q6V702 233 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 GDAP1Q8TB36 358 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 GRK7Q8WTQ7 553 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 CT55Q8WUE5 264 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 GLYATL1Q969I3 302 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 ELMO2Q96JJ3 720 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 PLEKHG4BQ96PX9 1271 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 ZSCAN5AQ9BUG6 496 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 TBC1D10AQ9BXI6 508 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 RAD18Q9NS91 495 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 ATXN10Q9UBB4 475 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 ASIC3Q9UHC3 531 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 PCYOX1Q9UHG3 505 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 ZNHIT2Q9UHR6 403 aa17.56■□□□□ 0.4
VCP-202ENST00000417448 DIDO1Q9BTC0 2240 aaKnown RBP17.55■□□□□ 0.4
VCP-202ENST00000417448 HIVEP1P15822 2718 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 A6NCN8 305 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 GAS8O95995 478 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 ZNF8P17098 575 aaPredicted RBP17.55■□□□□ 0.4
VCP-202ENST00000417448 EPHA4P54764 986 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 PLA2G4EQ3MJ16 856 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 CES3Q6UWW8 571 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 ADGRG6Q86SQ4 1221 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 RAVER1Q8IY67 606 aaKnown RBP17.55■□□□□ 0.4
VCP-202ENST00000417448 MPP5Q8N3R9 675 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 ZNF398Q8TD17 642 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 C19orf60Q96EN9 201 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 OR6C1Q96RD1 312 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 TRIM56Q9BRZ2 755 aaKnown RBP17.55■□□□□ 0.4
VCP-202ENST00000417448 TRIM31Q9BZY9 425 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 ACTL8Q9H568 366 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 EIF2B3Q9NR50 452 aaKnown RBP17.55■□□□□ 0.4
VCP-202ENST00000417448 CHRAC1Q9NRG0 131 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 OGFRQ9NZT2 677 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 NFKBIL1Q9UBC1 381 aaPredicted RBP17.55■□□□□ 0.4
VCP-202ENST00000417448 TBC1D29Q9UFV1 150 aa17.55■□□□□ 0.4
VCP-202ENST00000417448 FEZ2Q9UHY8 353 aaPredicted RBP17.55■□□□□ 0.4
VCP-202ENST00000417448 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.54■□□□□ 0.4
VCP-202ENST00000417448 MROH6A6NGR9 719 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 DNAJC6O75061 913 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 PRAMEF1O95521 474 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 C9P02748 559 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 TPSB2P20231 275 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 MC4RP32245 332 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 RPS18P62269 152 aaKnown RBP17.54■□□□□ 0.4
VCP-202ENST00000417448 DR1Q01658 176 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 PTK6Q13882 451 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 TPSAB1Q15661 275 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 CRTC3Q6UUV7 619 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 CAND1Q86VP6 1230 aaKnown RBP17.54■□□□□ 0.4
VCP-202ENST00000417448 RASGRP3Q8IV61 690 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 SPATA4Q8NEY3 305 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 CDKN2AIPNLQ96HQ2 116 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 C9orf72Q96LT7 481 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 SLC29A3Q9BZD2 475 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 ASB8Q9H765 288 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 AKIRIN1Q9H9L7 192 aaPredicted RBP17.54■□□□□ 0.4
VCP-202ENST00000417448 NLE1Q9NVX2 485 aaPredicted RBP17.54■□□□□ 0.4
VCP-202ENST00000417448 SYBUQ9NX95 663 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 LNPEPQ9UIQ6 1025 aa17.54■□□□□ 0.4
VCP-202ENST00000417448 CCDC162PA2VCL2 907 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 SRP72O76094 671 aaKnown RBP17.53■□□□□ 0.4
VCP-202ENST00000417448 TIAF1O95411 115 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 PYGLP06737 847 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 ADRA1DP25100 572 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 SEPHS1P49903 392 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 CCL11P51671 97 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 IL10RAQ13651 578 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 LAMB3Q13751 1172 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 LRP8Q14114 963 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 NR6A1Q15406 480 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 ZRANB3Q5FWF4 1079 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 GPRC6AQ5T6X5 926 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 IYDQ6PHW0 289 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 DET1Q7L5Y6 550 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 CHST15Q7LFX5 561 aaPredicted RBP17.53■□□□□ 0.4
VCP-202ENST00000417448 GALNT13Q8IUC8 556 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 C5orf34Q96MH7 638 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 PWWP2AQ96N64 755 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 MFRPQ9BY79 579 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 TRIM39Q9HCM9 518 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 LHX9Q9NQ69 397 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 MAP10Q9P2G4 905 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 RNF14Q9UBS8 474 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 SLC5A6Q9Y289 635 aa17.53■□□□□ 0.4
VCP-202ENST00000417448 ARGFXA6NJG6 315 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 CCDC188H7C350 402 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 BANF1O75531 89 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 CBX6O95503 412 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 IVDP26440 423 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 NMBRP28336 390 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 UGT8Q16880 541 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 TSTD2Q5T7W7 516 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 IZUMO3Q5VZ72 239 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 SLC6A19Q695T7 634 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms