RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 NOTCH2Q04721 2471 aa12.9□□□□□ -0.34
CTHRC1-202ENST00000415886 WIPF3A6NGB9 483 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 ZNF185O15231 689 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 SCRG1O75711 98 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 POP7O75817 140 aaKnown RBP12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 TMEM63AO94886 807 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 IFNB1P01574 187 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 ADRA1AP35348 466 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 HALP42357 657 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 ARL4DP49703 201 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 TMPRSS15P98073 1019 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 KLF1Q13351 362 aaPredicted RBP12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 NR6A1Q15406 480 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 GPR19Q15760 415 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 DNTTIP2Q5QJE6 756 aaKnown RBP12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 LCN10Q6JVE6 187 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 AMZ2Q86W34 360 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 SLC13A5Q86YT5 568 aaPredicted RBP12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 TAB3Q8N5C8 712 aaPredicted RBP12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 CCDC89Q8N998 374 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 DNAAF3Q8N9W5 541 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 SLC38A9Q8NBW4 561 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 TRIM58Q8NG06 486 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 ANP32BQ92688 251 aaKnown RBP12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 PCDHGB7Q9Y5F8 929 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 DNMT3AQ9Y6K1 912 aaPredicted RBP12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 ESPL1Q14674 2120 aa12.89□□□□□ -0.35
CTHRC1-202ENST00000415886 CACNA1DQ01668 2161 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 TCRBV7S2A1N4TA0A589 114 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 TLCD2A6NGC4 264 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 A6NL46 340 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 CFAP99D6REC4 459 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 SRP72O76094 671 aaKnown RBP12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 PRAMEF1O95521 474 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 TPH1P17752 444 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 TUBB4BP68371 445 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 OLIG2Q13516 323 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 SNX1Q13596 522 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 TUBB2AQ13885 445 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 PTPRCAPQ14761 206 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 PLCL1Q15111 1095 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 FNBP1LQ5T0N5 605 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 GPRC6AQ5T6X5 926 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 MEI1Q5TIA1 1274 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 PRAMEF17Q5VTA0 474 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 IZUMO3Q5VZ72 239 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 ZNF517Q6ZMY9 492 aaPredicted RBP12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 ZNF662Q6ZS27 426 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 GSTA5Q7RTV2 222 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 BPHLQ86WA6 291 aaPredicted RBP12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 KMT5CQ86Y97 462 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 TICAM1Q8IUC6 712 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 D2HGDHQ8N465 521 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 ENDOVQ8N8Q3 282 aaKnown RBP12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 SLC35B2Q8TB61 432 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 HEXDCQ8WVB3 486 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 MAIP1Q8WWC4 291 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 C1orf54Q8WWF1 131 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 PNPLA2Q96AD5 504 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 ULK4Q96C45 1275 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 ZNF501Q96CX3 271 aaPredicted RBP12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 TUBB2BQ9BVA1 445 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 ARNT2Q9HBZ2 717 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 CRLS1Q9UJA2 301 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 SNX7Q9UNH6 387 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 PSMD13Q9UNM6 376 aa12.88□□□□□ -0.35
CTHRC1-202ENST00000415886 MED13Q9UHV7 2174 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 PCSK5Q92824 1860 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 UBA6A0AVT1 1052 aaPredicted RBP12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 OR2AG2A6NM03 316 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 LIASO43766 372 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 METTL18O95568 372 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 ITGALP20701 1170 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 FDFT1P37268 417 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 ITGA1P56199 1179 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 HSD11B2P80365 405 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 RAPSNQ13702 412 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 RPE65Q16518 533 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 KLHL35Q6PF15 583 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 PPP1R21Q6ZMI0 780 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 FAM83HQ6ZRV2 1179 aaPredicted RBP12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 DET1Q7L5Y6 550 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 TAS2R42Q7RTR8 314 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 BEND7Q8N7W2 519 aaPredicted RBP12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 RASGEF1AQ8N9B8 481 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 DDHD1Q8NEL9 900 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 ATG4AQ8WYN0 398 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 PPM1MQ96MI6 270 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 GORASP1Q9BQQ3 440 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 GPR83Q9NYM4 423 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 TCFL5Q9UL49 500 aa12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 G3BP2Q9UN86 482 aaKnown RBP12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 CFAP20Q9Y6A4 193 aaKnown RBP12.87□□□□□ -0.35
CTHRC1-202ENST00000415886 OR5K3A6NET4 321 aa12.86□□□□□ -0.35
CTHRC1-202ENST00000415886 ERI2A8K979 691 aaKnown RBP12.86□□□□□ -0.35
CTHRC1-202ENST00000415886 CBX6O95503 412 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms