RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CTBP1Q13363 440 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 AAGABQ6PD74 315 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 GALNT13Q8IUC8 556 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 SCUBE1Q8IWY4 988 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 RASGEF1AQ8N9B8 481 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 PHC3Q8NDX5 983 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 OR1E3Q8WZA6 343 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 LPGAT1Q92604 370 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 PDXPQ96GD0 296 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 NDE1Q9NXR1 346 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 MOSPD1Q9UJG1 213 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 SNX11Q9Y5W9 270 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 DNMT3AQ9Y6K1 912 aaPredicted RBP14.26□□□□□ -0.13
SGCE-202ENST00000415788 IKBKGQ9Y6K9 419 aa14.26□□□□□ -0.13
SGCE-202ENST00000415788 B2RBV5 119 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 PATE3B3GLJ2 98 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 H3BMM5 538 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 YKT6O15498 198 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 GRID2O43424 1007 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 CER1O95813 267 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 TNFP01375 233 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 C1QAP02745 245 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 ESR1P03372 595 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 GSTM1P09488 218 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 MYL2P10916 166 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 POLD2P49005 469 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 ACTR3P61158 418 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 HNRNPKP61978 463 aaKnown RBP eCLIP14.25□□□□□ -0.131e-10■■■■■ 35.6
SGCE-202ENST00000415788 GSTM4Q03013 218 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 LRP8Q14114 963 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 ZNF423Q2M1K9 1284 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 KBTBD12Q3ZCT8 623 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 BCL7AQ4VC05 210 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 PYCR3Q53H96 274 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 ZNF648Q5T619 568 aaPredicted RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 MARK2Q7KZI7 788 aaKnown RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 LRRTM4Q86VH4 590 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 TRAPPC5Q8IUR0 188 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 PHACTR4Q8IZ21 702 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 C7orf26Q96N11 449 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 ELF4Q99607 663 aaPredicted RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 CPNE1Q99829 537 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 ECSITQ9BQ95 431 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 BOCQ9BWV1 1114 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 SLC13A1Q9BZW2 595 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 C1orf21Q9H246 121 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 CARS2Q9HA77 564 aaKnown RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 CYP4F12Q9HCS2 524 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 FBXO6Q9NRD1 293 aaPredicted RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 TRNAU1APQ9NX07 287 aaKnown RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 DNAJC28Q9NX36 388 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 GNPTGQ9UJJ9 305 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 COMMD10Q9Y6G5 202 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 UBA6A0AVT1 1052 aaPredicted RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 CAPN14A8MX76 684 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 KMOO15229 486 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 OR1I1O60431 355 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 KCNJ13O60928 360 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 OR56A5P0C7T3 313 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 JUNDP17535 347 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 GSTT1P30711 240 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 RXRGP48443 463 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 PRLHRP49683 370 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 IRX4P78413 519 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 BNC1Q01954 994 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 NHLH1Q02575 133 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 ATG16L1Q676U5 607 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 HID1Q8IV36 788 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 CTAGE3PQ8IX95 158 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 RAB3IL1Q8TBN0 382 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 TSACCQ96A04 125 aaPredicted RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 LINC00615Q96LM1 132 aaPredicted RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 FAM210AQ96ND0 272 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 OR2M4Q96R27 311 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 WWP1Q9H0M0 922 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 P2RY12Q9H244 342 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 CCDC68Q9H2F9 335 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 MRPL40Q9NQ50 206 aaKnown RBP14.25□□□□□ -0.13
SGCE-202ENST00000415788 SMYD2Q9NRG4 433 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 TAGLN3Q9UI15 199 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 COMMD3-BMI1R4GMX3 469 aa14.25□□□□□ -0.13
SGCE-202ENST00000415788 OR2AG2A6NM03 316 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 FTH1P02794 183 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 PIM1P11309 404 aaPredicted RBP14.24□□□□□ -0.13
SGCE-202ENST00000415788 GNPDA1P46926 289 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 CD151P48509 253 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 MPP1Q00013 466 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 EFTUD2Q15029 972 aaKnown RBP eCLIP14.24□□□□□ -0.13
SGCE-202ENST00000415788 CSRP2Q16527 193 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 TMEM220Q6QAJ8 160 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 DET1Q7L5Y6 550 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 RD3Q7Z3Z2 195 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 STRA8Q7Z7C7 330 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 KBTBD2Q8IY47 623 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 ST13P4Q8IZP2 240 aaPredicted RBP14.24□□□□□ -0.13
SGCE-202ENST00000415788 SDR16C5Q8N3Y7 309 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 PPM1NQ8N819 430 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 SLC44A1Q8WWI5 657 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 SGF29Q96ES7 293 aa14.24□□□□□ -0.13
SGCE-202ENST00000415788 PANX3Q96QZ0 392 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms