RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 CTF1Q16619 201 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 EML3Q32P44 896 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 LEXMQ3ZCV2 418 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 ARHGAP36Q6ZRI8 547 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 CHST15Q7LFX5 561 aaPredicted RBP13.03□□□□□ -0.32
HNF4A-204ENST00000415691 DSG4Q86SJ6 1040 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 C11orf74Q86VG3 221 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 ARHGAP12Q8IWW6 846 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 MINDY1Q8N5J2 469 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 FAM110BQ8TC76 370 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 ZFP90Q8TF47 636 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 PHF10Q8WUB8 498 aaKnown RBP13.03□□□□□ -0.32
HNF4A-204ENST00000415691 CAPSLQ8WWF8 208 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 ELSPBP1Q96BH3 223 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 MED30Q96HR3 178 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 GPR22Q99680 433 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 FAM83CQ9BQN1 747 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 OR2B2Q9GZK3 357 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 TP63Q9H3D4 680 aaPredicted RBP13.03□□□□□ -0.32
HNF4A-204ENST00000415691 HPS4Q9NQG7 708 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 NECTIN3Q9NQS3 549 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 NSMCE4AQ9NXX6 385 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 CRNNQ9UBG3 495 aaPredicted RBP13.03□□□□□ -0.32
HNF4A-204ENST00000415691 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 UGT2A1Q9Y4X1 527 aa13.03□□□□□ -0.32
HNF4A-204ENST00000415691 HELZP42694 1942 aaKnown RBP13.03□□□□□ -0.32
HNF4A-204ENST00000415691 A0A0D9SEW6 157 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 FAM149AA5PLN7 773 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 NEDD8-MDP1E9PL57 170 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 GUCY1B2O75343 617 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 GABARAPO95166 117 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 ALBP02768 609 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 BMP1P13497 986 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 GFAPP14136 432 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 HOXD9P28356 352 aaPredicted RBP13.02□□□□□ -0.32
HNF4A-204ENST00000415691 CD40LGP29965 261 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 CDH4P55283 916 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 SMAD2Q15796 467 aaKnown RBP13.02□□□□□ -0.32
HNF4A-204ENST00000415691 DGUOKQ16854 277 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 MPPE1Q53F39 396 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.32
HNF4A-204ENST00000415691 SLCO6A1Q86UG4 719 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 SLC22A16Q86VW1 577 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 NAT16Q8N8M0 369 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 OR6Q1Q8NGQ2 317 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 FCRL3Q96P31 734 aaPredicted RBP13.02□□□□□ -0.32
HNF4A-204ENST00000415691 LGMNQ99538 433 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 SH3GL1Q99961 368 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 OBP2AQ9NY56 170 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 CCDC167Q9P0B6 97 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 KLQ9UEF7 1012 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 NAALAD2Q9Y3Q0 740 aa13.02□□□□□ -0.32
HNF4A-204ENST00000415691 MN1Q10571 1320 aaPredicted RBP13.02□□□□□ -0.32
HNF4A-204ENST00000415691 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.02□□□□□ -0.33
HNF4A-204ENST00000415691 H0Y626 953 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 DFFAO00273 331 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 DLX3O60479 287 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 IL9P15248 144 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 TRPC1P48995 793 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 POLD2P49005 469 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 FOXM1Q08050 763 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 FCHO2Q0JRZ9 810 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 ZNF177Q13360 481 aaPredicted RBP13.02□□□□□ -0.33
HNF4A-204ENST00000415691 HTR4Q13639 388 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 DHCR24Q15392 516 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 HIST2H2ACQ16777 129 aaPredicted RBP13.02□□□□□ -0.33
HNF4A-204ENST00000415691 HJURPQ8NCD3 748 aaPredicted RBP13.02□□□□□ -0.33
HNF4A-204ENST00000415691 ERLEC1Q96DZ1 483 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 VPS39Q96JC1 886 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 RDH12Q96NR8 316 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 PHF7Q9BWX1 381 aaPredicted RBP13.02□□□□□ -0.33
HNF4A-204ENST00000415691 BBS2Q9BXC9 721 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 CAB39LQ9H9S4 337 aa13.02□□□□□ -0.33
HNF4A-204ENST00000415691 ZCWPW2A0A1B0GU75 182 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 ANHXE9PGG2 379 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 NME4O00746 187 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 SLC9A3R1O14745 358 aaPredicted RBP13.01□□□□□ -0.33
HNF4A-204ENST00000415691 CLDN11O75508 207 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 SNAP29O95721 258 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 CYP17A1P05093 508 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 BMP4P12644 408 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 NR4A1P22736 598 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 HTR1BP28222 390 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 GDI1P31150 447 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 ACVRL1P37023 503 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 PPP5CP53041 499 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
HNF4A-204ENST00000415691 CXorf57Q6NSI4 855 aaKnown RBP13.01□□□□□ -0.33
HNF4A-204ENST00000415691 THAP5Q7Z6K1 395 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 SPPL2CQ8IUH8 684 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 UMODL1-AS1Q8N2C9 162 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 ANKK1Q8NFD2 765 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 TP53INP1Q96A56 240 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 MFSD3Q96ES6 412 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 ING2Q9H160 280 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 GTSE1Q9NYZ3 720 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 NDUFAF1Q9Y375 327 aa13.01□□□□□ -0.33
HNF4A-204ENST00000415691 DENND4AQ7Z401 1863 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms