RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PREPP48147 710 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 HSPA14Q0VDF9 509 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 DNAJC3Q13217 504 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 RASA2Q15283 850 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 SEPT7Q16181 437 aaKnown RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 RBM20Q5T481 1227 aaKnown RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 EFL1Q7Z2Z2 1120 aaKnown RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 TBC1D21Q8IYX1 336 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 MREGQ8N565 214 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 PPM1NQ8N819 430 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 FBXO15Q8NCQ5 510 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 OR5K2Q8NHB8 316 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 TFGQ92734 400 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 CCDC74AQ96AQ1 378 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 GRAMD1AQ96CP6 724 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 CXorf40BQ96DE9 158 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 PDLIM5Q96HC4 596 aaKnown RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 C12orf66Q96MD2 445 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 GPR21Q99679 349 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 CCDC3Q9BQI4 270 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 RAB33BQ9H082 229 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 TFB2MQ9H5Q4 396 aaKnown RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 POLG2Q9UHN1 485 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 TRMT6Q9UJA5 497 aaKnown RBP11.63□□□□□ -0.55
ATG4B-207ENST00000415107 CACNA1AO00555 2505 aa11.63□□□□□ -0.55
ATG4B-207ENST00000415107 RHPN2P1A8MT19 583 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 KDM1AO60341 852 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 PSIP1O75475 530 aaKnown RBP11.62□□□□□ -0.55
ATG4B-207ENST00000415107 ITGA2BP08514 1039 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 ZNF37AP17032 561 aaPredicted RBP11.62□□□□□ -0.55
ATG4B-207ENST00000415107 CCNFP41002 786 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 RGS4P49798 205 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 SERPINB9P50453 376 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 CDKN2DP55273 166 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 SIM1P81133 766 aaPredicted RBP11.62□□□□□ -0.55
ATG4B-207ENST00000415107 SP140Q13342 867 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 PERM1Q5SV97 790 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 UBAP2Q5T6F2 1119 aaKnown RBP11.62□□□□□ -0.55
ATG4B-207ENST00000415107 CDCP2Q5VXM1 449 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 VRK3Q8IV63 474 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 DCUN1D3Q8IWE4 304 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 TRIM48Q8IWZ4 208 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 CTAGE3PQ8IX95 158 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 GSPT2Q8IYD1 628 aaKnown RBP11.62□□□□□ -0.55
ATG4B-207ENST00000415107 PHC3Q8NDX5 983 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 ACVR1CQ8NER5 493 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 TSPAN17Q96FV3 270 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 NDNQ99608 321 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 SLC30A3Q99726 388 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 OLFM1Q99784 485 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 PARD6BQ9BYG5 372 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 RRAGDQ9NQL2 400 aaPredicted RBP11.62□□□□□ -0.55
ATG4B-207ENST00000415107 PDP2Q9P2J9 529 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 EPHA6Q9UF33 1036 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 PSMD13Q9UNM6 376 aa11.62□□□□□ -0.55
ATG4B-207ENST00000415107 SPTBN4Q9H254 2564 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 IGHV1OR21-1A0A087WYE8 117 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 CCDC189A1A4V9 331 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 DCDC2BA2VCK2 349 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 GFYI3L273 518 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 GIPC1O14908 333 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 OPA1O60313 960 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 TSPAN12O95859 305 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 F7P08709 466 aaPredicted RBP11.61□□□□□ -0.55
ATG4B-207ENST00000415107 NUDT17P0C025 328 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 ITGB6P18564 788 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 SLC26A3P40879 764 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 MAGEA12P43365 314 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 CAPZBP47756 277 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 TAS2R39P59534 338 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 GPR18Q14330 331 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 SLC29A2Q14542 456 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 EFTUD2Q15029 972 aaKnown RBP eCLIP11.61□□□□□ -0.557e-8■■■■□ 21.6
ATG4B-207ENST00000415107 MAP9Q49MG5 647 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 ACSBG2Q5FVE4 666 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 WDR74Q6RFH5 385 aaPredicted RBP11.61□□□□□ -0.55
ATG4B-207ENST00000415107 CYHR1Q6ZMK1 362 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 RAB44Q7Z6P3 723 aaPredicted RBP11.61□□□□□ -0.55
ATG4B-207ENST00000415107 SLCO6A1Q86UG4 719 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 TDRPQ86YL5 185 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 CARFQ8N187 725 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 NKAPQ8N5F7 415 aaKnown RBP11.61□□□□□ -0.55
ATG4B-207ENST00000415107 GPATCH11Q8N954 259 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 SIDT2Q8NBJ9 832 aaKnown RBP11.61□□□□□ -0.55
ATG4B-207ENST00000415107 MAGEC3Q8TD91 643 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 FOPNLQ96NB1 174 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 PAFAH2Q99487 392 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 SLC38A3Q99624 504 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 MENTQ9BUN1 341 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 TRIT1Q9H3H1 467 aaKnown RBP11.61□□□□□ -0.55
ATG4B-207ENST00000415107 LRRN3Q9H3W5 708 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 SYTL2Q9HCH5 934 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 IMP3Q9NV31 184 aaKnown RBP11.61□□□□□ -0.55
ATG4B-207ENST00000415107 GALPQ9UBC7 116 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 SLC24A2Q9UI40 661 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 ASXL3Q9C0F0 2248 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 RP1P56715 2156 aa11.61□□□□□ -0.55
ATG4B-207ENST00000415107 MN1Q10571 1320 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-207ENST00000415107 SPAARA0A1B0GVQ0 90 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms