RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SFRP4Q6FHJ7 346 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 INTS8Q75QN2 995 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 AMZ2Q86W34 360 aa2.54□□□□□ -2
MCF2-204ENST00000414978 TMEM199Q8N511 208 aa2.54□□□□□ -2
MCF2-204ENST00000414978 UXS1Q8NBZ7 420 aa2.54□□□□□ -2
MCF2-204ENST00000414978 HUS1BQ8NHY5 278 aa2.54□□□□□ -2
MCF2-204ENST00000414978 WDR20Q8TBZ3 569 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SYAP1Q96A49 352 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 TMIGD2Q96BF3 282 aa2.54□□□□□ -2
MCF2-204ENST00000414978 AP2M1Q96CW1 435 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SNRNP40Q96DI7 357 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 Q96MF0 132 aa2.54□□□□□ -2
MCF2-204ENST00000414978 MXRA8Q9BRK3 442 aa2.54□□□□□ -2
MCF2-204ENST00000414978 PCGF1Q9BSM1 259 aa2.54□□□□□ -2
MCF2-204ENST00000414978 API5Q9BZZ5 524 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 WDR26Q9H7D7 661 aa2.54□□□□□ -2
MCF2-204ENST00000414978 UBE2ZQ9H832 354 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 IL1RAPL2Q9NP60 686 aa2.54□□□□□ -2
MCF2-204ENST00000414978 CD320Q9NPF0 282 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SLC2A4RGQ9NR83 387 aa2.54□□□□□ -2
MCF2-204ENST00000414978 DDX18Q9NVP1 670 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 INTS10Q9NVR2 710 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 TMEM51Q9NW97 253 aa2.54□□□□□ -2
MCF2-204ENST00000414978 COPG2Q9UBF2 871 aa2.54□□□□□ -2
MCF2-204ENST00000414978 OSGIN1Q9UJX0 560 aa2.54□□□□□ -2
MCF2-204ENST00000414978 FBXW11Q9UKB1 542 aa2.54□□□□□ -2
MCF2-204ENST00000414978 STX8Q9UNK0 236 aa2.54□□□□□ -2
MCF2-204ENST00000414978 TNNQ9UQP3 1299 aa2.54□□□□□ -2
MCF2-204ENST00000414978 MIA3Q5JRA6 1907 aa2.53□□□□□ -2
MCF2-204ENST00000414978 HTTP42858 3142 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TEX51A0A1B0GUA7 166 aa2.53□□□□□ -2
MCF2-204ENST00000414978 A0A1B0GWJ7 208 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TCAF2A6NFQ2 919 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TMEM221A6NGB7 291 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TTC34A8MYJ7 566 aa2.53□□□□□ -2
MCF2-204ENST00000414978 KDM4EB2RXH2 506 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 E7ENX8 843 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TMEM189-UBE2V1I3L0A0 370 aa2.53□□□□□ -2
MCF2-204ENST00000414978 M0R296 226 aa2.53□□□□□ -2
MCF2-204ENST00000414978 NDC80O14777 642 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GBAP04062 536 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PRNPP04156 253 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ASGR1P07306 291 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TPM2P07951 284 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CYC1P08574 325 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CYP3A4P08684 503 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CCDC159P0C7I6 412 aa2.53□□□□□ -2
MCF2-204ENST00000414978 HOXB9P17482 250 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 IL10P22301 178 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PON1P27169 355 aa2.53□□□□□ -2
MCF2-204ENST00000414978 IDUAP35475 653 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CCR3P51677 355 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TAP2Q03519 686 aa2.53□□□□□ -2
MCF2-204ENST00000414978 RELQ04864 619 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 SCN1BQ07699 218 aa2.53□□□□□ -2
MCF2-204ENST00000414978 NIPAL4Q0D2K0 466 aa2.53□□□□□ -2
MCF2-204ENST00000414978 NPRL3Q12980 569 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PLA2G7Q13093 441 aa2.53□□□□□ -2
MCF2-204ENST00000414978 UBE2V1Q13404 147 aa2.53□□□□□ -2
MCF2-204ENST00000414978 DNASE1L3Q13609 305 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CST9LP1Q5W188 147 aa2.53□□□□□ -2
MCF2-204ENST00000414978 DRICH1Q6PGQ1 229 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 GLB1LQ6UWU2 654 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ATG4DQ86TL0 474 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 CCDC190Q86UF4 302 aa2.53□□□□□ -2
MCF2-204ENST00000414978 SERPINA12Q8IW75 414 aa2.53□□□□□ -2
MCF2-204ENST00000414978 MFN1Q8IWA4 741 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CCDC83Q8IWF9 413 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ZBTB2Q8N680 514 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ABHD11Q8NFV4 315 aa2.53□□□□□ -2
MCF2-204ENST00000414978 OR52K2Q8NGK3 314 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 ANKRD49Q8WVL7 239 aa2.53□□□□□ -2
MCF2-204ENST00000414978 IGFBPL1Q8WX77 278 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ARHGAP45Q92619 1136 aa2.53□□□□□ -2
MCF2-204ENST00000414978 RND1Q92730 232 aa2.53□□□□□ -2
MCF2-204ENST00000414978 SPXQ9BT56 116 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CHMP1AQ9HD42 196 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 Q9N2J8 555 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TMLHEQ9NVH6 421 aa2.53□□□□□ -2
MCF2-204ENST00000414978 MIS18AQ9NYP9 233 aa2.53□□□□□ -2
MCF2-204ENST00000414978 AMACRQ9UHK6 382 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ICKQ9UPZ9 632 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TNFSF13BQ9Y275 285 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PKP3Q9Y446 797 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GREB1Q4ZG55 1949 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.53□□□□□ -2
MCF2-204ENST00000414978 SYNJ2BP-COX16A0A087WUM0 186 aa2.53□□□□□ -2
MCF2-204ENST00000414978 NPEPPSL1A6NEC2 478 aa2.53□□□□□ -2
MCF2-204ENST00000414978 LOC730098B7Z3J9 87 aa2.53□□□□□ -2
MCF2-204ENST00000414978 NCF1P14598 390 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 HLA-DPA1P20036 260 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TACR2P21452 398 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ADSSP30520 456 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CCR1P32246 355 aa2.53□□□□□ -2
MCF2-204ENST00000414978 MDH1P40925 334 aaKnown RBP2.53□□□□□ -2
MCF2-204ENST00000414978 NUCB2P80303 420 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TLE3Q04726 772 aa2.53□□□□□ -2
MCF2-204ENST00000414978 STIM1Q13586 685 aa2.53□□□□□ -2
MCF2-204ENST00000414978 KRT24Q2M2I5 525 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms