RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TMTC4Q5T4D3 741 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 ARMC3Q5W041 872 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 PTRHD1Q6GMV3 140 aaKnown RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 MRNIPQ6NTE8 343 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 ZNF534Q76KX8 674 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 SDCCAG8Q86SQ7 713 aaPredicted RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 LDB1Q86U70 411 aaPredicted RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 PPP1R3BQ86XI6 285 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 KMT5CQ86Y97 462 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 NLGN4XQ8N0W4 816 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 MPP5Q8N3R9 675 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 NLGN4YQ8NFZ3 816 aaPredicted RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 GSDMBQ8TAX9 411 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 KLHL6Q8WZ60 621 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 NKD1Q969G9 470 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 KIAA1143Q96AT1 154 aaPredicted RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 ELMO2Q96JJ3 720 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 PDLIM2Q96JY6 352 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 MAP3K3Q99759 626 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 KIFC1Q9BW19 673 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 TRIT1Q9H3H1 467 aaKnown RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 TREX1Q9NSU2 369 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 SIDT1Q9NXL6 827 aaKnown RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 SOX13Q9UN79 622 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 MGAQ8IWI9 3026 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 MAGEB16A2A368 324 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 SDR42E2A6NKP2 422 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 GOLGA8MH3BSY2 632 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 ZNF185O15231 689 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 AVILO75366 819 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 ZBTB11O95625 1053 aaPredicted RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 APOA4P06727 396 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 MLNP12872 115 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 CDH3P22223 829 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 ARCN1P48444 511 aaKnown RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 CSE1LP55060 971 aaKnown RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 HSD11B2P80365 405 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 ACY1Q03154 408 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 HSPA14Q0VDF9 509 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 SEMA3AQ14563 771 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 TMED2Q15363 201 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 ZNF658BQ4V348 819 aaPredicted RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 SOWAHCQ53LP3 525 aaPredicted RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 CES3Q6UWW8 571 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 XKR5Q6UX68 686 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 NAPRTQ6XQN6 538 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 HOOK3Q86VS8 718 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 AMIGO1Q86WK6 493 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 TBC1D21Q8IYX1 336 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 CARFQ8N187 725 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 ESX1Q8N693 406 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 LSM14AQ8ND56 463 aaKnown RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 OR52E1Q8NGJ3 308 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 SNRNP27Q8WVK2 155 aaKnown RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 ASZ1Q8WWH4 475 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 CPT1BQ92523 772 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 MFSD3Q96ES6 412 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 PANX3Q96QZ0 392 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 HGH1Q9BTY7 390 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 EFHD1Q9BUP0 239 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 CARD6Q9BX69 1037 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 ULBP3Q9BZM4 244 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 TFB2MQ9H5Q4 396 aaKnown RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 XAB2Q9HCS7 855 aaKnown RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 SOHLH2Q9NX45 425 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 POLG2Q9UHN1 485 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 GNPTGQ9UJJ9 305 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 PILRAQ9UKJ1 303 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 RARRES3Q9UL19 164 aa10.9□□□□□ -0.66
RFFL-204ENST00000414419 TDRKHQ9Y2W6 561 aaKnown RBP10.9□□□□□ -0.66
RFFL-204ENST00000414419 SPTBP11277 2137 aa10.9□□□□□ -0.67
RFFL-204ENST00000414419 PCM1Q15154 2024 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 SLC5A10A0PJK1 596 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 USP27XA6NNY8 438 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 C2orf74A8MZ97 194 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 KPNA5O15131 536 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 ATXN7O15265 892 aaPredicted RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 RPN2P04844 631 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 CCNYL3P0C7X3 344 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 MAGEA6P43360 314 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 EIF3BP55884 814 aaKnown RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 SRSF6Q13247 344 aaKnown RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 TUBB3Q13509 450 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 DHX34Q14147 1143 aaKnown RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 RNF187Q5TA31 235 aaPredicted RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 ANKRD22Q5VYY1 191 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 KIAA1614Q5VZ46 1190 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 BPHLQ86WA6 291 aaPredicted RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 LRRC6Q86X45 466 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 MCUQ8NE86 351 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 OR5AR1Q8NGP9 310 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 OR5K2Q8NHB8 316 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 STAMBPL1Q96FJ0 436 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 SLC41A2Q96JW4 573 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 CAPZA3Q96KX2 299 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 TCF12Q99081 682 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 ARHGAP9Q9BRR9 750 aa10.89□□□□□ -0.67
RFFL-204ENST00000414419 GPN2Q9H9Y4 310 aaPredicted RBP10.89□□□□□ -0.67
RFFL-204ENST00000414419 C1GALT1Q9NS00 363 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms