RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ACADLP28330 430 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 STAT5AP42229 794 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 NPY2RP49146 381 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 PRAMEP78395 509 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 HSD11B2P80365 405 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 C19orf57Q0VDD7 668 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 PRKG2Q13237 762 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 MAP7Q14244 749 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.21■□□□□ 0.35
LSM5-204ENST00000409909 FASTKD1Q53R41 847 aaKnown RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 ARMC6Q6NXE6 501 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 ZNF449Q6P9G9 518 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 C6orf15Q6UXA7 325 aaPredicted RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 LDB1Q86U70 411 aaPredicted RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 KMT5CQ86Y97 462 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 RASGRP3Q8IV61 690 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 D2HGDHQ8N465 521 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 GALNT6Q8NCL4 622 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 OR52E1Q8NGJ3 308 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 ELMO1Q92556 727 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.21■□□□□ 0.352e-6■■■■■ 59.4
LSM5-204ENST00000409909 TRIT1Q9H3H1 467 aaKnown RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 KCNF1Q9H3M0 494 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 TFB2MQ9H5Q4 396 aaKnown RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 GPN2Q9H9Y4 310 aaPredicted RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 TREX1Q9NSU2 369 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 POMT2Q9UKY4 750 aa17.21■□□□□ 0.35
LSM5-204ENST00000409909 TTC7AQ9ULT0 858 aaPredicted RBP17.21■□□□□ 0.35
LSM5-204ENST00000409909 BSNQ9UPA5 3926 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 GOLGA6L3A6NEY3 463 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 BTN3A1O00481 513 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 NKX2-8O15522 239 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 OR56A5P0C7T3 313 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 TPSB2P20231 275 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 F8A1P23610 371 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 MGAT1P26572 445 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 NMBRP28336 390 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 TERF1P54274 439 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 TUBB3Q13509 450 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 TPSAB1Q15661 275 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 PWWP2BQ6NUJ5 590 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 PPP1R3BQ86XI6 285 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 ESX1Q8N693 406 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 OR5AR1Q8NGP9 310 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 MED8Q96G25 268 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 SLC45A3Q96JT2 553 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 PBKQ96KB5 322 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 HGH1Q9BTY7 390 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 AP1M1Q9BXS5 423 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 IL22Q9GZX6 179 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 XKR8Q9H6D3 395 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 PDE7BQ9NP56 450 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 FGF21Q9NSA1 209 aa17.2■□□□□ 0.34
LSM5-204ENST00000409909 CD3EAPO15446 510 aaKnown RBP17.19■□□□□ 0.34
LSM5-204ENST00000409909 ZBTB11O95625 1053 aaPredicted RBP17.19■□□□□ 0.34
LSM5-204ENST00000409909 TPBGLP0DKB5 382 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 ITGB6P18564 788 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 CCR7P32248 378 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 ARL4DP49703 201 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 VPS41P49754 854 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 CDK16Q00536 496 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 KCNJ11Q14654 390 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 GPR19Q15760 415 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 LRRC8BQ6P9F7 803 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 AMIGO1Q86WK6 493 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 ADGRF3Q8IZF5 1079 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 CARFQ8N187 725 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 SLC35F6Q8N357 371 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 LKAAEAR1Q8TD35 194 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 COG1Q8WTW3 980 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 MAGOHBQ96A72 148 aaKnown RBP17.19■□□□□ 0.34
LSM5-204ENST00000409909 KIAA1143Q96AT1 154 aaPredicted RBP17.19■□□□□ 0.34
LSM5-204ENST00000409909 TTC1Q99614 292 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 KIFC1Q9BW19 673 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 CATSPERZQ9NTU4 200 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 SYBUQ9NX95 663 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 BFARQ9NZS9 450 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 LNPEPQ9UIQ6 1025 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 RARRES3Q9UL19 164 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 RPS6KL1Q9Y6S9 549 aa17.19■□□□□ 0.34
LSM5-204ENST00000409909 SPTBP11277 2137 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.18■□□□□ 0.34
LSM5-204ENST00000409909 GSAPA4D1B5 854 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 SLC9B1P1A6NJY1 282 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 ZNF891A8MT65 544 aaPredicted RBP17.18■□□□□ 0.34
LSM5-204ENST00000409909 IQCF5A8MTL0 148 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 TERTO14746 1132 aaKnown RBP17.18■□□□□ 0.34
LSM5-204ENST00000409909 AVILO75366 819 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 KRT14P02533 472 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 FAM87AP0C7U9 286 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 ARNTP27540 789 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 PRDX3P30048 256 aaKnown RBP17.18■□□□□ 0.34
LSM5-204ENST00000409909 MAGEA6P43360 314 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 CSE1LP55060 971 aaKnown RBP17.18■□□□□ 0.34
LSM5-204ENST00000409909 ACY1Q03154 408 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 GPS1Q13098 491 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 PRKAA1Q13131 559 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 ANKRD22Q5VYY1 191 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 CES3Q6UWW8 571 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 VRK3Q8IV63 474 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms