RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CD151P48509 253 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 RPA4Q13156 261 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 PRKG2Q13237 762 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 ITIH4Q14624 930 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 BRD3Q15059 726 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 DEFB109BQ30KR1 87 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 TSTD2Q5T7W7 516 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 CYB5D1Q6P9G0 228 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 CCDC89Q8N998 374 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 OR52E1Q8NGJ3 308 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 UBE2Q2Q8WVN8 375 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 TFGQ92734 400 aaPredicted RBP18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 SLC25A18Q9H1K4 315 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 CASS4Q9NQ75 786 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 POMT2Q9UKY4 750 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 PADI1Q9ULC6 663 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 MYO18BQ8IUG5 2567 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 GSAPA4D1B5 854 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 SLC9B1P1A6NJY1 282 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 BTN3A3O00478 584 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 KATNA1O75449 491 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 GOT2P00505 430 aaKnown RBP18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 CCNYL3P0C7X3 344 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 RPL22P35268 128 aaKnown RBP18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 TUBB4BP68371 445 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 PRKAA1Q13131 559 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 KCNAB2Q13303 367 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 TUBB2AQ13885 445 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 PACS1Q6VY07 963 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 RANBP9Q96S59 729 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 HGH1Q9BTY7 390 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 TUBB2BQ9BVA1 445 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 ADNPQ9H2P0 1102 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 XKR8Q9H6D3 395 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 MVB12BQ9H7P6 319 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 LHX9Q9NQ69 397 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 SOHLH2Q9NX45 425 aa18.74■□□□□ 0.59
SMARCB1-204ENST00000407422 SEC16AO15027 2179 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 ASH1LQ9NR48 2969 aaKnown RBP18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 BTN3A1O00481 513 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 FURINP09958 794 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 CCDC175P0C221 793 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 ADRA1DP25100 572 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 MC1RQ01726 317 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 BOP1Q14137 746 aaKnown RBP18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 CCNG2Q16589 344 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 ZNF449Q6P9G9 518 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 ZNF662Q6ZS27 426 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 ZNF534Q76KX8 674 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 LRRC8AQ8IWT6 810 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 CT55Q8WUE5 264 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 ELMO1Q92556 727 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 ZNF501Q96CX3 271 aaPredicted RBP18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 TLR10Q9BXR5 811 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 TFB2MQ9H5Q4 396 aaKnown RBP18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 PAK5Q9P286 719 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 BTRCQ9Y297 605 aa18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 HEMK1Q9Y5R4 338 aaPredicted RBP18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 SNRNP200O75643 2136 aaKnown RBP18.73■□□□□ 0.59
SMARCB1-204ENST00000407422 GSTM1P09488 218 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 CDH3P22223 829 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 PRDX3P30048 256 aaKnown RBP18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 GSTM4Q03013 218 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 ACVR1Q04771 509 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 ERV3-1Q14264 604 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 SEMA3AQ14563 771 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 CRTC2Q53ET0 693 aaPredicted RBP18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 PRAMEF17Q5VTA0 474 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 FAM199XQ6PEV8 388 aaPredicted RBP18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 BPHLQ86WA6 291 aaPredicted RBP18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 CARFQ8N187 725 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 OR5AR1Q8NGP9 310 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 OR6P1Q8NGX9 317 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 FCRL4Q96PJ5 515 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 RUFY1Q96T51 708 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 C1GALT1Q9NS00 363 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 TCAF1Q9Y4C2 921 aa18.72■□□□□ 0.59
SMARCB1-204ENST00000407422 BHMG1C9JSJ3 638 aaPredicted RBP18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 LIN7AO14910 233 aaPredicted RBP18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 FGGP02679 453 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 FTH1P02794 183 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 MT-ND3P03897 115 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 ACADLP28330 430 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 DNASE1L3Q13609 305 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 TMTC4Q5T4D3 741 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 AFTPHQ6ULP2 937 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 TMEM135Q86UB9 458 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 AMIGO1Q86WK6 493 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 ADGRF3Q8IZF5 1079 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 SLC38A9Q8NBW4 561 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 OR4L1Q8NH43 312 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 APOBEC4Q8WW27 367 aaKnown RBP18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 KLHL25Q9H0H3 589 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 CHRAC1Q9NRG0 131 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 KCND1Q9NSA2 647 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 RIMKLBQ9ULI2 386 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 PCDHB3Q9Y5E6 796 aa18.71■□□□□ 0.59
SMARCB1-204ENST00000407422 SLC5A10A0PJK1 596 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 MATN2O00339 956 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 QSOX1O00391 747 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms