RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 IMP3Q9NV31 184 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ZDHHC7Q9NXF8 308 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SUCOQ9UBS9 1254 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC7A8Q9UHI5 535 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CD84Q9UIB8 345 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC9A8Q9Y2E8 581 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 AP4B1Q9Y6B7 739 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 BRWD3Q6RI45 1802 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HNRNPCL2B2RXH8 293 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HHLA1C9JL84 531 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 FAM20BO75063 409 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SH3BGRLO75368 114 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SIX3O95343 332 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CST1P01037 141 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HPGDP15428 266 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ITGAXP20702 1163 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PTX3P26022 381 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC7A1P30825 629 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ETV4P43268 484 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC7A9P82251 487 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 FOLH1Q04609 750 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ILF3Q12906 894 aaKnown RBP eCLIP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SEMA3BQ13214 749 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 NFATC2Q13469 925 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PWP1Q13610 501 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ZC3H12BQ5HYM0 836 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CDKL4Q5MAI5 379 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CCNYL2Q5T2Q4 361 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 MFSD4BQ5TF39 518 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 FAM91A1Q658Y4 838 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CCDC81Q6ZN84 652 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HID1Q8IV36 788 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 NRSN1Q8IZ57 195 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 LIX1Q8N485 282 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 EFCAB3Q8N7B9 438 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TXNDC5Q8NBS9 432 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 C11orf65Q8NCR3 313 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 OR4A15Q8NGL6 344 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 EEF1AKMT1Q8WVE0 214 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HERVK_113Q902F9 699 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 RORBQ92753 470 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 OTULINQ96BN8 352 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ASB9Q96DX5 294 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC47A1Q96FL8 570 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CLPTM1LQ96KA5 538 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TEFMQ96QE5 360 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 LRRC3Q9BY71 257 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 RIBC2Q9H4K1 309 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SYNDIG1Q9H7V2 258 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 POLMQ9NP87 494 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CCNB1IP1Q9NPC3 277 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TMEM45AQ9NWC5 275 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ELOVL2Q9NXB9 296 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 IFT80Q9P2H3 777 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 KLHL42Q9P2K6 505 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TRPS1Q9UHF7 1281 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PAIP2BQ9ULR5 123 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 MRPS33Q9Y291 106 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 C2orf78A6NCI8 922 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 A8MUI8 341 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 FPGTO14772 594 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 NPC1O15118 1278 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 TGM5O43548 720 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 PEX1O43933 1283 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 PCCBP05166 539 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 EPORP19235 508 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 TNNI3P19429 210 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 RPS3P23396 243 aaKnown RBP eCLIP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 POU1F1P28069 291 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 AKT2P31751 481 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 AFF1P51825 1210 aaKnown RBP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 NFKB2Q00653 900 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 ALDH6A1Q02252 535 aaKnown RBP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 C2orf80Q0P641 193 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 HEPACAMQ14CZ8 416 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 NCF4Q15080 339 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 TEAD4Q15561 434 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 TGFBIQ15582 683 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 ZNHIT3Q15649 155 aaPredicted RBP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 ATP13A5Q4VNC0 1218 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 ACSBG2Q5FVE4 666 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 TNFAIP8L3Q5GJ75 292 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 BROXQ5VW32 411 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 METTL2BQ6P1Q9 378 aaKnown RBP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 SPESP1Q6UW49 350 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 HTR3DQ70Z44 454 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 AMIGO2Q86SJ2 522 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 PIM3Q86V86 326 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 LRRTM4Q86VH4 590 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 CNTN4Q8IWV2 1026 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 TP53INP2Q8IXH6 220 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 HDDC3Q8N4P3 179 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 PACRGLQ8N7B6 248 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 TSPAN14Q8NG11 270 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 ISG20Q96AZ6 181 aaKnown RBP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 GAS2L1Q99501 681 aaPredicted RBP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 CDCA3Q99618 268 aaPredicted RBP4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 CD244Q9BZW8 370 aa4.65□□□□□ -1.66
PCDH11X-207ENST00000406881 LMAN2LQ9H0V9 348 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms