RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 CWH43Q9H720 699 aa18.12■□□□□ 0.49
EWSR1-207ENST00000406548 ACTR8Q9H981 624 aa18.12■□□□□ 0.49
EWSR1-207ENST00000406548 TMEM161AQ9NX61 479 aa18.12■□□□□ 0.49
EWSR1-207ENST00000406548 USE1Q9NZ43 259 aa18.12■□□□□ 0.49
EWSR1-207ENST00000406548 OARD1Q9Y530 152 aa18.12■□□□□ 0.49
EWSR1-207ENST00000406548 ELOVL7A1L3X0 281 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 FFAR3O14843 346 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 GPR42O15529 346 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 COCHO43405 550 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 CBFA2T3O75081 653 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 PRAMEF12O95522 483 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 BCL10O95999 233 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 ITGB6P18564 788 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 FLT3LGP49771 235 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 RAB15P59190 212 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SMU1Q2TAY7 513 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 DNAJC14Q6Y2X3 702 aaPredicted RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 CERS6Q6ZMG9 384 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SAPCD2Q86UD0 394 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 MSRB3Q8IXL7 192 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SPARTQ8N0X7 666 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 PCSK9Q8NBP7 692 aaKnown RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 GLB1L3Q8NCI6 653 aaPredicted RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 CHDHQ8NE62 594 aaPredicted RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 LKAAEAR1Q8TD35 194 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SGCDQ92629 289 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 FAM126AQ9BYI3 521 aaPredicted RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 DPY30Q9C005 99 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 AMBRA1Q9C0C7 1298 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 GPN2Q9H9Y4 310 aaPredicted RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SLC25A37Q9NYZ2 338 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 LHX3Q9UBR4 397 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 UTS2RQ9UKP6 389 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 ZNF510Q9Y2H8 683 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 ANGPTL3Q9Y5C1 460 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 PCDHB9Q9Y5E1 797 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SLC28A1O00337 649 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 CXCR6O00574 342 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 NOBOXO60393 691 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 STC2O76061 302 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SCELO95171 688 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 ZNF7P17097 686 aaPredicted RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 RPS3P23396 243 aaKnown RBP eCLIP18.11■□□□□ 0.497e-9■■□□□ 13.8
EWSR1-207ENST00000406548 HMGCLP35914 325 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 PIGAP37287 484 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 PIK3CGP48736 1102 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 RGS4P49798 205 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 GABARAPL2P60520 117 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 LAPTM5Q13571 262 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SPANXN4Q5MJ08 99 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 SERPINA9Q86WD7 417 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 HS3ST5Q8IZT8 346 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 LIX1Q8N485 282 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 TTC16Q8NEE8 873 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 DDHD1Q8NEL9 900 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 OR52E4Q8NGH9 312 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 EGFL8Q99944 293 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 RBM4BQ9BQ04 359 aaKnown RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 RBM4Q9BWF3 364 aaKnown RBP18.11■□□□□ 0.49
EWSR1-207ENST00000406548 APOL5Q9BWW9 433 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 LTB4R2Q9NPC1 389 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 PSME2Q9UL46 239 aa18.11■□□□□ 0.49
EWSR1-207ENST00000406548 H7C4K7 107 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 GNGT2O14610 69 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 FZD6O60353 706 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 ZBTB11O95625 1053 aaPredicted RBP18.1■□□□□ 0.49
EWSR1-207ENST00000406548 IL6P05231 212 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 PGRP06401 933 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 ZNF12P17014 697 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 CTPS1P17812 591 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 SLC11A1P49279 550 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 BMXP51813 675 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 HMGCS1Q01581 520 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 IMPG1Q17R60 797 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 C6orf141Q5SZD1 244 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 HECTD3Q5T447 861 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 CACHD1Q5VU97 1274 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 GTF2IRD2BQ6EKJ0 949 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 FAM151BQ6UXP7 276 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 RNF165Q6ZSG1 346 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 GTF2IRD2Q86UP8 949 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 SH3GL1Q99961 368 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 TBCDQ9BTW9 1192 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 BEGAINQ9BUH8 593 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 ZFP14Q9HCL3 533 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 WWOXQ9NZC7 414 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 HCSTQ9UBK5 93 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 OPTCQ9UBM4 332 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 KLQ9UEF7 1012 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 GNPTGQ9UJJ9 305 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 BLOC1S6Q9UL45 172 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 PDE10AQ9Y233 779 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 ZNF840PA6NDX5 716 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 PRAMEF1O95521 474 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 PLA2G16P53816 162 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 FCGRTP55899 365 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 KCNAB2Q13303 367 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 MEP1AQ16819 746 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 RUNDC3AQ59EK9 446 aa18.1■□□□□ 0.49
EWSR1-207ENST00000406548 RGMBQ6NW40 437 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms