RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 OR2AJ1Q8NGZ0 328 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 OR5R1Q8NH85 324 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 HMGCLL1Q8TB92 370 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 WASF1Q92558 559 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 CCDC47Q96A33 483 aaKnown RBP4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 SEPHS2Q99611 448 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 KXD1Q9BQD3 176 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 ACAT2Q9BWD1 397 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 DPAGT1Q9H3H5 408 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 CNIH4Q9P003 139 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 POLLQ9UGP5 575 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 ARMCX3Q9UH62 379 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 FBXL2Q9UKC9 423 aa4.75□□□□□ -1.65
HMGB1P13-201ENST00000406019 PRAG1Q86YV5 1406 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 A0A1B0GVT2 93 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 SOCS6O14544 535 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 IKBKBO14920 756 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLC16A5O15375 505 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZBTB43O43298 467 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 XRCC3O43542 346 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLC28A2O43868 658 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 KERAO60938 352 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 RTN2O75298 545 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 OLFM2O95897 454 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 VIMP08670 466 aaKnown RBP4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 OR2T7P0C7T2 308 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 RPL3P39023 403 aaKnown RBP4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 MXI1P50539 228 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 CTF1Q16619 201 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 CDO1Q16878 200 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 KLHL22Q53GT1 634 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 KCNT1Q5JUK3 1230 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 PAPPA-AS1Q5QFB9 102 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZNF449Q6P9G9 518 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 FAM219AQ8IW50 185 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 DBF4BQ8NFT6 615 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 UTP15Q8TED0 518 aaKnown RBP4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 DNAAF4Q8WXU2 420 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 SEPT1Q8WYJ6 367 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 CPNE1Q99829 537 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 UTP14AQ9BVJ6 771 aaKnown RBP4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 DCLK3Q9C098 648 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZNF350Q9GZX5 532 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 TMEM206Q9H813 350 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 TBC1D17Q9HA65 648 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 LMAN1LQ9HAT1 526 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 PCDH9Q9HC56 1237 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 TUFT1Q9NNX1 390 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 MYNNQ9NPC7 610 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 SEPT10Q9P0V9 454 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 PCDHGA1Q9Y5H4 931 aa4.74□□□□□ -1.65
HMGB1P13-201ENST00000406019 C4orf47A7E2U8 309 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLC33A1O00400 549 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 VWA5AO00534 786 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 DVL1O14640 695 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 PNPP00491 289 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 GMPSP49915 693 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 KHKP50053 298 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 CLCNKAP51800 687 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 NUDT6P53370 316 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 ADARP55265 1226 aaKnown RBP4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 PTENP60484 403 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 STX1BP61266 288 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZXDBP98169 803 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 RCN2Q14257 317 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLC39A12Q504Y0 691 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 TMEM182Q6ZP80 229 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 Q6ZTK2 550 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 KLHL7Q8IXQ5 586 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZNF619Q8N2I2 560 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 OR7G3Q8NG95 312 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 MAGEC3Q8TD91 643 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZFAND2BQ8WV99 257 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 HEXDCQ8WVB3 486 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 RSPH1Q8WYR4 309 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 TEKT1Q969V4 418 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 PHF21BQ96EK2 531 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 OTUB1Q96FW1 271 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 HES6Q96HZ4 224 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 AK8Q96MA6 479 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLA2Q9H6Q3 261 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 HHATLQ9HCP6 504 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 DPP3Q9NY33 737 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 ABT1Q9ULW3 272 aaKnown RBP4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 PA2G4Q9UQ80 394 aaKnown RBP4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 GRIP1Q9Y3R0 1128 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 LOXL2Q9Y4K0 774 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 PTGDR2Q9Y5Y4 395 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 CKAP5Q14008 2032 aa4.73□□□□□ -1.65
HMGB1P13-201ENST00000406019 A0A1W2PRV1 198 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 RTCAO00442 366 aaKnown RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 WISP2O76076 250 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 CYP1A2P05177 515 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 CD22P20273 847 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 MPZP25189 248 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 AZGP1P25311 298 aaKnown RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 KCNJ1P48048 391 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 SNU13P55769 128 aaKnown RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 EGR4Q05215 589 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 LTBQ06643 244 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms