RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PTPRSQ13332 1948 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 FAM92AA1XBS5 289 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 C2orf81A6NN90 581 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 PFDN6O15212 129 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 KATNA1O75449 491 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 HTR1AP08908 422 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 TTPAP49638 278 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 CDKN1CP49918 316 aaPredicted RBP19.48■□□□□ 0.71
CCDC47-202ENST00000403162 HTR6P50406 440 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 CCR3P51677 355 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 GSTM4Q03013 218 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 GNA12Q03113 381 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 ATP1A4Q13733 1029 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 NFE2Q16621 373 aaPredicted RBP19.48■□□□□ 0.71
CCDC47-202ENST00000403162 HABP4Q5JVS0 413 aaKnown RBP19.48■□□□□ 0.71
CCDC47-202ENST00000403162 IL27RAQ6UWB1 636 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 DCBLD1Q8N8Z6 715 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 ZNF555Q8NEP9 628 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 MUL1Q969V5 352 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 ZNF558Q96NG5 402 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 CDK15Q96Q40 435 aa19.48■□□□□ 0.71
CCDC47-202ENST00000403162 MTIF3Q9H2K0 278 aaKnown RBP19.48■□□□□ 0.71
CCDC47-202ENST00000403162 CARS2Q9HA77 564 aaKnown RBP19.48■□□□□ 0.71
CCDC47-202ENST00000403162 PAIP2BQ9ULR5 123 aaKnown RBP19.48■□□□□ 0.71
CCDC47-202ENST00000403162 TMEM221A6NGB7 291 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 SYN3O14994 580 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 OAZ2O95190 189 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 KCNH1O95259 989 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 CAPN1P07384 714 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 HOXD9P28356 352 aaPredicted RBP19.47■□□□□ 0.71
CCDC47-202ENST00000403162 CLCN4P51793 760 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 DGKQP52824 942 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 MLLT10P55197 1068 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 ELAVL2Q12926 359 aaKnown RBP19.47■□□□□ 0.71
CCDC47-202ENST00000403162 TOP3AQ13472 1001 aaPredicted RBP19.47■□□□□ 0.71
CCDC47-202ENST00000403162 KIAA0040Q15053 153 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 PCBP2Q15366 365 aaKnown RBP eCLIP19.47■□□□□ 0.71
CCDC47-202ENST00000403162 PIANPQ8IYJ0 282 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 CHCHD4Q8N4Q1 142 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 OR2T12Q8NG77 320 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 OR52E4Q8NGH9 312 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 METTL6Q8TCB7 284 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 SGCDQ92629 289 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 KCNJ9Q92806 393 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 RMDN1Q96DB5 314 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 B3GALT6Q96L58 329 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 PSKH2Q96QS6 385 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 RBM4BQ9BQ04 359 aaKnown RBP19.47■□□□□ 0.71
CCDC47-202ENST00000403162 RBM4Q9BWF3 364 aaKnown RBP19.47■□□□□ 0.71
CCDC47-202ENST00000403162 AMBRA1Q9C0C7 1298 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 SELENONQ9NZV5 590 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 ARIH1Q9Y4X5 557 aaPredicted RBP19.47■□□□□ 0.71
CCDC47-202ENST00000403162 C1orf232A0A0U1RR37 186 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 HMBSP08397 361 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 LAG3P18627 525 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 RING1Q06587 406 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 NR6A1Q15406 480 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 NADSYN1Q6IA69 706 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 PSAPL1Q6NUJ1 521 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 IGFN1Q86VF2 1251 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 FAM86B1Q8N7N1 296 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 ZNF548Q8NEK5 533 aaPredicted RBP19.47■□□□□ 0.71
CCDC47-202ENST00000403162 NSMCE3Q96MG7 304 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 C17orf80Q9BSJ5 609 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 SMURF2Q9HAU4 748 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 NAALAD2Q9Y3Q0 740 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 INSL6Q9Y581 213 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 COMMD10Q9Y6G5 202 aa19.47■□□□□ 0.71
CCDC47-202ENST00000403162 SLC12A8A0AV02 714 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 CST1P01037 141 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 HTRA4P83105 476 aaPredicted RBP19.46■□□□□ 0.71
CCDC47-202ENST00000403162 NKG7Q16617 165 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 C10orf120Q5SQS8 335 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 VARS2Q5ST30 1063 aaKnown RBP19.46■□□□□ 0.71
CCDC47-202ENST00000403162 ENPP6Q6UWR7 440 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 SLC16A12Q6ZSM3 486 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 ZBTB46Q86UZ6 589 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 GALNT13Q8IUC8 556 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 FIG4Q92562 907 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 IGSF21Q96ID5 467 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 ZNF347Q96SE7 839 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 FUNDC2Q9BWH2 189 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 DOLKQ9UPQ8 538 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 POLR3HQ9Y535 204 aaPredicted RBP19.46■□□□□ 0.71
CCDC47-202ENST00000403162 GREB1Q4ZG55 1949 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 GSTA4O15217 222 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 OR1I1O60431 355 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 ITIH1P19827 911 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 TACR2P21452 398 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 LPOP22079 712 aaPredicted RBP19.46■□□□□ 0.71
CCDC47-202ENST00000403162 PIGAP37287 484 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 MAGEA11P43364 429 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 TPD52P55327 224 aaPredicted RBP19.46■□□□□ 0.71
CCDC47-202ENST00000403162 MEP1AQ16819 746 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 AP5B1Q2VPB7 878 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 CTU2Q2VPK5 515 aaKnown RBP19.46■□□□□ 0.71
CCDC47-202ENST00000403162 TAS1R1Q7RTX1 841 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 ABHD11Q8NFV4 315 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 GIPC2Q8TF65 315 aa19.46■□□□□ 0.71
CCDC47-202ENST00000403162 FBXO32Q969P5 355 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms