RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 DUX1O43812 170 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 CPNE6O95741 557 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 RPLP0P05388 317 aaKnown RBP17.23■□□□□ 0.35
CTNS-203ENST00000399306 TUBBP07437 444 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 ABHD2P08910 425 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 ITGB6P18564 788 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 MCM3P25205 808 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 CCL7P80098 99 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 SHC2P98077 582 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 SPIDRQ14159 915 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 GPR18Q14330 331 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 GRTP1Q5TC63 336 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 KLHL35Q6PF15 583 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 WDR74Q6RFH5 385 aaPredicted RBP17.23■□□□□ 0.35
CTNS-203ENST00000399306 RBM44Q6ZP01 1051 aaKnown RBP17.23■□□□□ 0.35
CTNS-203ENST00000399306 ACVR1CQ8NER5 493 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 OR5K2Q8NHB8 316 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 FBF1Q8TES7 1133 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 DEPDC7Q96QD5 511 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 TRIT1Q9H3H1 467 aaKnown RBP17.23■□□□□ 0.35
CTNS-203ENST00000399306 TFB2MQ9H5Q4 396 aaKnown RBP17.23■□□□□ 0.35
CTNS-203ENST00000399306 ACSS3Q9H6R3 686 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 POPDC3Q9HBV1 291 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 SMYD2Q9NRG4 433 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 FAM8A1Q9UBU6 413 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 EPHA6Q9UF33 1036 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 VWA7Q9Y334 891 aa17.23■□□□□ 0.35
CTNS-203ENST00000399306 D6RAR5 112 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 MT-CO3P00414 261 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 MPC1LP0DKB6 136 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 KCNA4P22459 653 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 CD1CP29017 333 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 ALDH4A1P30038 563 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 CCNFP41002 786 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 OR1D5P58170 312 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 FOXK2Q01167 660 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 TRA2AQ13595 282 aaKnown RBP eCLIP17.22■□□□□ 0.35
CTNS-203ENST00000399306 KRT33BQ14525 404 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 KBTBD12Q3ZCT8 623 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 HES3Q5TGS1 186 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 WDR93Q6P2C0 686 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 CAPN12Q6ZSI9 719 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 PIM3Q86V86 326 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 CD200R1Q8TD46 325 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 MAGEC3Q8TD91 643 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 UBXN4Q92575 508 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 FOPNLQ96NB1 174 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 TMEM74Q96NL1 305 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 TXLNGYQ9BZA5 131 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 ANKZF1Q9H8Y5 726 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 PDP2Q9P2J9 529 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 SLC24A2Q9UI40 661 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 TRMT6Q9UJA5 497 aaKnown RBP17.22■□□□□ 0.35
CTNS-203ENST00000399306 CLCA2Q9UQC9 943 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 ASF1AQ9Y294 204 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 PSAT1Q9Y617 370 aa17.22■□□□□ 0.35
CTNS-203ENST00000399306 CXorf49A8MYA2 514 aaPredicted RBP17.21■□□□□ 0.35
CTNS-203ENST00000399306 UBXN7O94888 489 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 MATN4O95460 622 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 FDXRP22570 491 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 CCKBRP32239 447 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 SPRP35270 261 aaPredicted RBP17.21■□□□□ 0.35
CTNS-203ENST00000399306 RGS4P49798 205 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 TIAL1Q01085 375 aaKnown RBP eCLIP17.21■□□□□ 0.35
CTNS-203ENST00000399306 POU4F1Q01851 419 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 BRD3Q15059 726 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 HECTD2Q5U5R9 776 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 CCNI2Q6ZMN8 369 aaPredicted RBP17.21■□□□□ 0.35
CTNS-203ENST00000399306 VRK3Q8IV63 474 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 Q8N9G6 341 aaPredicted RBP17.21■□□□□ 0.35
CTNS-203ENST00000399306 FBXO15Q8NCQ5 510 aaPredicted RBP17.21■□□□□ 0.35
CTNS-203ENST00000399306 PHC3Q8NDX5 983 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 OR4D9Q8NGE8 314 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 AHCYL2Q96HN2 611 aaKnown RBP17.21■□□□□ 0.35
CTNS-203ENST00000399306 VPS39Q96JC1 886 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 FERD3LQ96RJ6 166 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 GPR21Q99679 349 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 GPR22Q99680 433 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 RBBP8Q99708 897 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 SLC17A6Q9P2U8 582 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 NEUROG3Q9Y4Z2 214 aa17.21■□□□□ 0.35
CTNS-203ENST00000399306 A0A087WUV0 522 aaPredicted RBP17.2■□□□□ 0.34
CTNS-203ENST00000399306 MATN2O00339 956 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 TOX3O15405 576 aaPredicted RBP17.2■□□□□ 0.34
CTNS-203ENST00000399306 PROS1P07225 676 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 LIMK2P53671 638 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 ZFP36L1Q07352 338 aaKnown RBP17.2■□□□□ 0.34
CTNS-203ENST00000399306 KLHL38Q2WGJ6 581 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 CCDC157Q569K6 752 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 RBM20Q5T481 1227 aaKnown RBP17.2■□□□□ 0.34
CTNS-203ENST00000399306 TMEM71Q6P5X7 295 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 TTC23LQ6PF05 361 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 NAPRTQ6XQN6 538 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 PLXDC1Q8IUK5 500 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 RASGRP3Q8IV61 690 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 DCUN1D3Q8IWE4 304 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 CTAGE3PQ8IX95 158 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 CARFQ8N187 725 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 CHCHD4Q8N4Q1 142 aa17.2■□□□□ 0.34
CTNS-203ENST00000399306 GIMAP7Q8NHV1 300 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms