RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FAM47E-STBD1D6RA91 191 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 E2F3O00716 465 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 TREHO43280 583 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 HTR7P34969 479 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 EIF2DP41214 584 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 PPP5CP53041 499 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 CDC42EP1Q00587 391 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 PON2Q15165 354 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 AP5B1Q2VPB7 878 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 LINC00299Q6ZSB3 139 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 LRRC49Q8IUZ0 686 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 LYSMD2Q8IV50 215 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 RAVER1Q8IY67 606 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 ATP6V0D2Q8N8Y2 350 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 POC5Q8NA72 575 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 RHOXF1Q8NHV9 184 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 MCFD2Q8NI22 146 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 C17orf50Q8WW18 174 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 NMUR1Q9HB89 426 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 PCDHGB1Q9Y5G3 927 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 SNPHO15079 494 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 SPNP16150 400 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 OGNP20774 298 aaKnown RBP13.74□□□□□ -0.21
APOB-202ENST00000399256 MLLT6P55198 1093 aaPredicted RBP13.74□□□□□ -0.21
APOB-202ENST00000399256 PCBP1Q15365 356 aaKnown RBP eCLIP13.74□□□□□ -0.21
APOB-202ENST00000399256 GCNT7Q6ZNI0 430 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 SAPCD2Q86UD0 394 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 CIR1Q86X95 450 aaPredicted RBP13.74□□□□□ -0.21
APOB-202ENST00000399256 AADATQ8N5Z0 425 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 SLC13A3Q8WWT9 602 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 LGALS12Q96DT0 336 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 TSPAN18Q96SJ8 248 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 BCL7BQ9BQE9 202 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 PRDM8Q9NQV8 689 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 GRXCR2A6NFK2 248 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 ARVCFO00192 962 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 ANKRD28O15084 1053 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 MUSKO15146 869 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 SLC16A6O15403 523 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 NIPSNAP2O75323 286 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 NDUFS3O75489 264 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 SERPINA1P01009 418 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 IGFBP5P24593 272 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 ACVR2AP27037 513 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 GRK3P35626 688 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 ST13P50502 369 aaKnown RBP13.74□□□□□ -0.21
APOB-202ENST00000399256 IFITM2Q01629 132 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 PTPRNQ16849 979 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 FAM174BQ3ZCQ3 159 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 SCD5Q86SK9 330 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 LRRTM3Q86VH5 581 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 GPSM1Q86YR5 675 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 UMODL1-AS1Q8N2C9 162 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 ZNF540Q8NDQ6 660 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 EEF1AKMT1Q8WVE0 214 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 ZNF566Q969W8 418 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 CDKN2AIPNLQ96HQ2 116 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
APOB-202ENST00000399256 MYOCQ99972 504 aa13.74□□□□□ -0.21
APOB-202ENST00000399256 SARS2Q9NP81 518 aaKnown RBP13.74□□□□□ -0.21
APOB-202ENST00000399256 UPK1BO75841 260 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 KCNK2O95069 426 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 SLC2A4P14672 509 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 RPL38P63173 70 aaKnown RBP13.73□□□□□ -0.21
APOB-202ENST00000399256 SLC35A2P78381 396 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 ADAM17P78536 824 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 TYSND1Q2T9J0 566 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 LRIT3Q3SXY7 679 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 MSANTD2Q6P1R3 559 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 SLC22A15Q8IZD6 547 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 GTF3C2Q8WUA4 911 aaPredicted RBP13.73□□□□□ -0.21
APOB-202ENST00000399256 ZHX1-C8orf76Q96EF9 292 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 LINGO1Q96FE5 620 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 C1QTNF3Q9BXJ4 246 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 HOXD1Q9GZZ0 328 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 SLC25A37Q9NYZ2 338 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 TPRKBQ9Y3C4 175 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 A0A1W2PQH9 124 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 NUAK1O60285 661 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 LCKP06239 509 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 GSNP06396 782 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 ITGB6P18564 788 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 MSH3P20585 1137 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 BRCC3P46736 316 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 ABRAXAS2Q15018 415 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 SYT6Q5T7P8 510 aaPredicted RBP13.73□□□□□ -0.21
APOB-202ENST00000399256 DPP9Q86TI2 863 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 CYP4Z1Q86W10 505 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 RASAL3Q86YV0 1011 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 MSRB3Q8IXL7 192 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 FAM83FQ8NEG4 500 aaPredicted RBP13.73□□□□□ -0.21
APOB-202ENST00000399256 NETO1Q8TDF5 533 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 FBLIM1Q8WUP2 373 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 GTF2H4Q92759 462 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 PYCR2Q96C36 320 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 SMIM14Q96QK8 99 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 PTPN18Q99952 460 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 NDEL1Q9GZM8 345 aa13.73□□□□□ -0.21
APOB-202ENST00000399256 ZMYM5Q9UJ78 669 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms