RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CYP4F3Q08477 520 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 RBM48Q5RL73 367 aaKnown RBP25.1■■□□□ 1.61
COL13A1-203ENST00000398969 NECAB2Q7Z6G3 386 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 C8orf59Q8N0T1 100 aaPredicted RBP25.1■■□□□ 1.61
COL13A1-203ENST00000398969 OR10A6Q8NH74 314 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 SLC22A17Q8WUG5 538 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 SDCCAG3Q96C92 435 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 THUMPD3Q9BV44 507 aaKnown RBP25.1■■□□□ 1.61
COL13A1-203ENST00000398969 CIPCQ9C0C6 399 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 IKZF5Q9H5V7 419 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 CWH43Q9H720 699 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 OGDHLQ9ULD0 1010 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 EIF3LQ9Y262 564 aaKnown RBP25.1■■□□□ 1.61
COL13A1-203ENST00000398969 PCDHB9Q9Y5E1 797 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 GOLGA8CPA6NN73 597 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 ABCB7O75027 752 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 STC2O76061 302 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 ALDH2P05091 517 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 SLC11A1P49279 550 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 MAPK10P53779 464 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 FAM174BQ3ZCQ3 159 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 PTRHD1Q6GMV3 140 aaKnown RBP25.1■■□□□ 1.61
COL13A1-203ENST00000398969 ZNF554Q86TJ5 538 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 CRIPAKQ8N1N5 446 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 C2orf15Q8WU43 125 aaKnown RBP25.1■■□□□ 1.61
COL13A1-203ENST00000398969 SNX19Q92543 992 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 PLD4Q96BZ4 506 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 SMURF2Q9HAU4 748 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 HPS4Q9NQG7 708 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 GKN1Q9NS71 199 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 LHX3Q9UBR4 397 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.1■■□□□ 1.61
COL13A1-203ENST00000398969 LIMD1Q9UGP4 676 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 ADGRE2Q9UHX3 823 aa25.1■■□□□ 1.61
COL13A1-203ENST00000398969 MAP4P27816 1152 aaKnown RBP25.09■■□□□ 1.61
COL13A1-203ENST00000398969 AKT1P31749 480 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 TTC23Q5W5X9 447 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 R3HCC1LQ7Z5L2 792 aaKnown RBP25.09■■□□□ 1.61
COL13A1-203ENST00000398969 ZNF784Q8NCA9 323 aaPredicted RBP25.09■■□□□ 1.61
COL13A1-203ENST00000398969 SNRNP27Q8WVK2 155 aaKnown RBP25.09■■□□□ 1.61
COL13A1-203ENST00000398969 SCLYQ96I15 445 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 MBOAT4Q96T53 435 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 GPR63Q9BZJ6 419 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 ADNPQ9H2P0 1102 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 FAM118AQ9NWS6 357 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 ZNF840PA6NDX5 716 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 RGS14O43566 566 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 FZD6O60353 706 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 CST1P01037 141 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 IL7RP16871 459 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 ZNF182P17025 639 aaPredicted RBP25.09■■□□□ 1.61
COL13A1-203ENST00000398969 ITGB6P18564 788 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 HMGCLP35914 325 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 PIK3CGP48736 1102 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 TUBA3CQ13748 450 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 MAPKAPK3Q16644 382 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 HECTD3Q5T447 861 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 PRSS55Q6UWB4 352 aaPredicted RBP25.09■■□□□ 1.61
COL13A1-203ENST00000398969 CERS6Q6ZMG9 384 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 ZC3H7AQ8IWR0 971 aaKnown RBP25.09■■□□□ 1.61
COL13A1-203ENST00000398969 MSRB3Q8IXL7 192 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 PDZD8Q8NEN9 1154 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 LKAAEAR1Q8TD35 194 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 SLC47A1Q96FL8 570 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 OSBPL10Q9BXB5 764 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 CLPBQ9H078 707 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 RNF208Q9H0X6 261 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 SLC25A37Q9NYZ2 338 aa25.09■■□□□ 1.61
COL13A1-203ENST00000398969 PLXNA4Q9HCM2 1894 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 FFAR3O14843 346 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 GPR42O15529 346 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 CTPS1P17812 591 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 PPP2R2BQ00005 443 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 CARNMT1Q8N4J0 409 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 HDAC2Q92769 488 aaKnown RBP25.08■■□□□ 1.61
COL13A1-203ENST00000398969 BOCQ9BWV1 1114 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 LHPPQ9H008 270 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 UTS2RQ9UKP6 389 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 OARD1Q9Y530 152 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 PCDHGA8Q9Y5G5 932 aa25.08■■□□□ 1.61
COL13A1-203ENST00000398969 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 NT5C1B-RDH14C9J2C7 533 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 H7C4K7 107 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 UGT1A1P22309 533 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 UGT1A4P22310 534 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 UGT1A3P35503 534 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 UGT1A5P35504 534 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 ATN1P54259 1190 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 ADGRF1Q5T601 910 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 FAM43BQ6ZT52 329 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 TAS1R1Q7RTX1 841 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 SERPINA9Q86WD7 417 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 TTC16Q8NEE8 873 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 PJA1Q8NG27 643 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 GIPC3Q8TF64 312 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 SGCDQ92629 289 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 AMBRA1Q9C0C7 1298 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 LTB4R2Q9NPC1 389 aa25.07■■□□□ 1.6
COL13A1-203ENST00000398969 FARSBQ9NSD9 589 aaKnown RBP25.07■■□□□ 1.6
COL13A1-203ENST00000398969 TDRKHQ9Y2W6 561 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms