RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 MSH3P20585 1137 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 ALDH4A1P30038 563 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CBX5P45973 191 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CCR10P46092 362 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 TFAMQ00059 246 aaKnown RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 EMX2Q04743 252 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 ELP6Q0PNE2 266 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 SCRN3Q0VDG4 424 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 MRPL28Q13084 256 aaKnown RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 GRIK4Q16099 956 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CDO1Q16878 200 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CTU2Q2VPK5 515 aaKnown RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 TRIM60Q495X7 471 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 KLHL12Q53G59 568 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 ZNF667Q5HYK9 610 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 TOR2AQ5JU69 321 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 GARNL3Q5VVW2 1013 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 SDE2Q6IQ49 451 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 METTL2BQ6P1Q9 378 aaKnown RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 FAM171BQ6P995 826 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 BLOC1S3Q6QNY0 202 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 KLHL6Q8WZ60 621 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CIDECQ96AQ7 238 aaPredicted RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 TUBGCP3Q96CW5 907 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 TNIP3Q96KP6 325 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 FRMD6Q96NE9 622 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 PPP1R2P1Q96PQ5 205 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 MCMBPQ9BTE3 642 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 POLR3FQ9H1D9 316 aaPredicted RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 TMEM134Q9H6X4 195 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CASS4Q9NQ75 786 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 TIGARQ9NQ88 270 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 SDR39U1Q9NRG7 319 aaPredicted RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 ERVK-18Q9QC07 812 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 PHF11Q9UIL8 331 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 MAPRE3Q9UPY8 281 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 RNF6Q9Y252 685 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 KLHL20Q9Y2M5 609 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CSNK1G3Q9Y6M4 447 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 A0A1W2PRG6 482 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 MBLAC1A4D2B0 266 aaPredicted RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 OR2A25A4D2G3 310 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 OR6C70A6NIJ9 312 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 LEUTXA8MZ59 168 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 TMEM233B4DJY2 109 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 PRMT5O14744 637 aaPredicted RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 OR2B3O76000 313 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 MICAL2O94851 1124 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 SEMA3DO95025 777 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 ALPPP05187 535 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 HDCP19113 662 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 SAT1P21673 171 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 UQCRC1P31930 480 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 GGT5P36269 586 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 MAGEA11P43364 429 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 GZMKP49863 264 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 ORC1Q13415 861 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CAPRIN1Q14444 709 aaKnown RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 QPRTQ15274 297 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 TARBP2Q15633 366 aaKnown RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 NAPEPLDQ6IQ20 393 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 GDF6Q6KF10 455 aaPredicted RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 ZPBP2Q6X784 338 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 SPATC1Q76KD6 591 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 PID1Q7Z2X4 250 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 HID1Q8IV36 788 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 FUNDC1Q8IVP5 155 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 VWA5B2Q8N398 1253 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 OR5B17Q8NGF7 314 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 OR52E4Q8NGH9 312 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 BSNDQ8WZ55 320 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 TMEM176AQ96HP8 235 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 HYLS1Q96M11 299 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 CCDC115Q96NT0 180 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 FCRL3Q96P31 734 aaPredicted RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 AGAP2Q99490 1192 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 VAT1Q99536 393 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 FAM83DQ9H4H8 585 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 SYNDIG1Q9H7V2 258 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 GORASP2Q9H8Y8 452 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 NTN4Q9HB63 628 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 MAT2BQ9NZL9 334 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 KLHL8Q9P2G9 620 aaPredicted RBP9.73□□□□□ -0.85
APTX-207ENST00000397172 GLS2Q9UI32 602 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 TRHDEQ9UKU6 1024 aa9.73□□□□□ -0.85
APTX-207ENST00000397172 WDR81Q562E7 1941 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 DNAH12Q6ZR08 3092 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 FAM95CA0A1B0GW59 222 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 ATP6V1G2-DDX39BF2Z307 99 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 FXYD1O00168 92 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 ENPP3O14638 875 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 PQBP1O60828 265 aaKnown RBP9.72□□□□□ -0.85
APTX-207ENST00000397172 HUS1O60921 280 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 FADS2O95864 444 aaKnown RBP9.72□□□□□ -0.85
APTX-207ENST00000397172 FGF4P08620 206 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 CLTBP09497 229 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 LTA4HP09960 611 aaKnown RBP9.72□□□□□ -0.85
APTX-207ENST00000397172 ACADMP11310 421 aa9.72□□□□□ -0.85
APTX-207ENST00000397172 HNRNPLP14866 589 aaKnown RBP eCLIP9.72□□□□□ -0.85
APTX-207ENST00000397172 AGXTP21549 392 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms