RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 TXLNBQ8N3L3 684 aa18.31■□□□□ 0.52
MCF2L-207ENST00000397024 RNF10Q8N5U6 811 aaKnown RBP18.31■□□□□ 0.52
MCF2L-207ENST00000397024 C9orf43Q8TAL5 461 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-207ENST00000397024 C1orf54Q8WWF1 131 aa18.31■□□□□ 0.52
MCF2L-207ENST00000397024 TUBB2BQ9BVA1 445 aa18.31■□□□□ 0.52
MCF2L-207ENST00000397024 KCND1Q9NSA2 647 aa18.31■□□□□ 0.52
MCF2L-207ENST00000397024 KCND3Q9UK17 655 aa18.31■□□□□ 0.52
MCF2L-207ENST00000397024 BTRCQ9Y297 605 aa18.31■□□□□ 0.52
MCF2L-207ENST00000397024 PCDHB3Q9Y5E6 796 aa18.31■□□□□ 0.52
MCF2L-207ENST00000397024 CDC14CA4D256 554 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 K7EM74 188 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 BTN3A1O00481 513 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 MT-ND3P03897 115 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
MCF2L-207ENST00000397024 PRDX3P30048 256 aaKnown RBP18.3■□□□□ 0.52
MCF2L-207ENST00000397024 STIP1P31948 543 aaKnown RBP18.3■□□□□ 0.52
MCF2L-207ENST00000397024 FOXN2P32314 431 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 CD151P48509 253 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 CSRP3P50461 194 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 PRKG2Q13237 762 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 BOP1Q14137 746 aaKnown RBP18.3■□□□□ 0.52
MCF2L-207ENST00000397024 CYB5D1Q6P9G0 228 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 NAPRTQ6XQN6 538 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 SLC13A5Q86YT5 568 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-207ENST00000397024 GLIS1Q8NBF1 620 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 OR52E1Q8NGJ3 308 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 ZNF778Q96MU6 729 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 TLR10Q9BXR5 811 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 TFB2MQ9H5Q4 396 aaKnown RBP18.3■□□□□ 0.52
MCF2L-207ENST00000397024 XKR8Q9H6D3 395 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 SLC2A6Q9UGQ3 507 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 GUCA1BQ9UMX6 200 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 RELNP78509 3460 aa18.3■□□□□ 0.52
MCF2L-207ENST00000397024 IFRD1O00458 451 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-207ENST00000397024 AP2A2O94973 939 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 CDH3P22223 829 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 RPS18P62269 152 aaKnown RBP18.29■□□□□ 0.52
MCF2L-207ENST00000397024 TLE1Q04724 770 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 RPA4Q13156 261 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 GPS2Q13227 327 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 SNX1Q13596 522 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 LAMB3Q13751 1172 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 BRD3Q15059 726 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 COLEC12Q5KU26 742 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 LCN10Q6JVE6 187 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 LINC00523Q86TU6 105 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 ADGRF3Q8IZF5 1079 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 CARFQ8N187 725 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 OR13J1Q8NGT2 312 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 TFGQ92734 400 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-207ENST00000397024 HDAC10Q969S8 669 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 TWSG1Q9GZX9 223 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 ACTL8Q9H568 366 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 MVB12BQ9H7P6 319 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 C1GALT1Q9NS00 363 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 SOHLH2Q9NX45 425 aa18.29■□□□□ 0.52
MCF2L-207ENST00000397024 SPENQ96T58 3664 aaKnown RBP18.28■□□□□ 0.52
MCF2L-207ENST00000397024 GSAPA4D1B5 854 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 C21orf140B9A014 251 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 OR1I1O60431 355 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 SCRG1O75711 98 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 SUN1O94901 812 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 RECKO95980 971 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 IFNB1P01574 187 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 TPBGLP0DKB5 382 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 PVRP15151 417 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 ST6GAL1P15907 406 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 NR1D1P20393 614 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 ACADLP28330 430 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 CDH17Q12864 832 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 ABRQ12979 859 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 PRKAA1Q13131 559 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 TMTC4Q5T4D3 741 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 TMEM126BQ8IUX1 230 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 DNAAF3Q8N9W5 541 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 OR5AR1Q8NGP9 310 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 ALS2CR12Q96Q35 445 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 HGH1Q9BTY7 390 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 PITPNM3Q9BZ71 974 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 KLHL25Q9H0H3 589 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 VPS37BQ9H9H4 285 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 ZNF148Q9UQR1 794 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 POLHQ9Y253 713 aa18.28■□□□□ 0.52
MCF2L-207ENST00000397024 MED13Q9UHV7 2174 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 ERI2A8K979 691 aaKnown RBP18.27■□□□□ 0.52
MCF2L-207ENST00000397024 BHMG1C9JSJ3 638 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-207ENST00000397024 CPNE3O75131 537 aaKnown RBP18.27■□□□□ 0.52
MCF2L-207ENST00000397024 ZSCAN5DPP0CG00 497 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 PTPN4P29074 926 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 FDFT1P37268 417 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 NSG1P42857 185 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 ITIH4Q14624 930 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 SIX1Q15475 284 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-207ENST00000397024 ZNF789Q5FWF6 425 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 PLEKHS1Q5SXH7 462 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 TSTD2Q5T7W7 516 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 PACS1Q6VY07 963 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 ZNF517Q6ZMY9 492 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-207ENST00000397024 AMIGO1Q86WK6 493 aa18.27■□□□□ 0.52
MCF2L-207ENST00000397024 OR8K5Q8NH50 307 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms