RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 A8MU76 341 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 NDST3O95803 873 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 NPPAP01160 153 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 IGLV3-27P01718 113 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 F11P03951 625 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 FMO3P31513 532 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 CHRNB3Q05901 458 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 PGS1Q32NB8 556 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 CXCL17Q6UXB2 119 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 METTL23Q86XA0 190 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 SLC22A15Q8IZD6 547 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 GABPB2Q8TAK5 448 aaPredicted RBP13.68□□□□□ -0.22
NUP98-204ENST00000397004 MGME1Q9BQP7 344 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 NSUN3Q9H649 340 aaKnown RBP13.68□□□□□ -0.22
NUP98-204ENST00000397004 ACTR8Q9H981 624 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 SARS2Q9NP81 518 aaKnown RBP13.68□□□□□ -0.22
NUP98-204ENST00000397004 USE1Q9NZ43 259 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 CD274Q9NZQ7 290 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 DNAJB9Q9UBS3 223 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 SUN2Q9UH99 717 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 TRPV2Q9Y5S1 764 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 TYW5A2RUC4 315 aaKnown RBP13.68□□□□□ -0.22
NUP98-204ENST00000397004 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
NUP98-204ENST00000397004 ITIH1P19827 911 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 RAB15P59190 212 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 B3GNT8Q7Z7M8 397 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 CLHC1Q8NHS4 586 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 LKAAEAR1Q8TD35 194 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 SLC47A1Q96FL8 570 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 C17orf80Q9BSJ5 609 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 CCSER2Q9H7U1 834 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 DAPK2Q9UIK4 370 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 PCDHGA10Q9Y5H3 936 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 FFAR3O14843 346 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 GPR42O15529 346 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 VNN2O95498 520 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 HPRP00739 348 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 PKMP14618 531 aaKnown RBP13.68□□□□□ -0.22
NUP98-204ENST00000397004 CR2P20023 1033 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 JAK1P23458 1154 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 PSMA3P25788 255 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 HOXD12P35452 270 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 NCS1P62166 190 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 FKBP1BP68106 108 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 NR6A1Q15406 480 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 GLT6D1Q7Z4J2 308 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 ABHD8Q96I13 439 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 NODALQ96S42 347 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.68□□□□□ -0.22
NUP98-204ENST00000397004 PCDHB14Q9Y5E9 798 aa13.68□□□□□ -0.22
NUP98-204ENST00000397004 CLDN25C9JDP6 229 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 H3BNC9 293 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 HS6ST1O60243 411 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 GABARAPO95166 117 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 ITGB6P18564 788 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 OR8J3Q8NGG0 315 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 YIPF2Q9BWQ6 316 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 SERHLQ9NQF3 203 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 INTS6Q9UL03 887 aaKnown RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 NDUFS3O75489 264 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 CYP4B1P13584 511 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 PTPN6P29350 595 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 CYP4F3Q08477 520 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 TUSC3Q13454 348 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 DET1Q7L5Y6 550 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 SLCO6A1Q86UG4 719 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 TRPV1Q8NER1 839 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 GTF3C2Q8WUA4 911 aaPredicted RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 SLC13A3Q8WWT9 602 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 PYCR2Q96C36 320 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 YIPF6Q96EC8 236 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 TRIM62Q9BVG3 475 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 ZFP14Q9HCL3 533 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 HTR3EA5X5Y0 456 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 NDUFS2O75306 463 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 HOXB9P17482 250 aaPredicted RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 MC4RP32245 332 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 CLK3P49761 638 aaKnown RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 RPL38P63173 70 aaKnown RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 TRIM32Q13049 653 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 ZNF300Q96RE9 604 aaPredicted RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 THUMPD3Q9BV44 507 aaKnown RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 KAT8Q9H7Z6 458 aaKnown RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 DCAF13Q9NV06 445 aaKnown RBP13.67□□□□□ -0.22
NUP98-204ENST00000397004 COMMD8Q9NX08 183 aa13.67□□□□□ -0.22
NUP98-204ENST00000397004 SCN10AQ9Y5Y9 1956 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 SYCE1LA8MT33 242 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 CD160O95971 181 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 FTH1P02794 183 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 CDKN2CP42773 168 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 EIF2B2P49770 351 aaKnown RBP13.66□□□□□ -0.22
NUP98-204ENST00000397004 TSPY1Q01534 308 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 DSC3Q14574 896 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 ZNF235Q14590 738 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 ZXDCQ2QGD7 858 aaPredicted RBP13.66□□□□□ -0.22
NUP98-204ENST00000397004 TRIM16LQ309B1 348 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 PARP15Q460N3 678 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 INPP5KQ9BT40 448 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 BOCQ9BWV1 1114 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms