RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SVOPQ8N4V2 548 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 DNAJB8Q8NHS0 232 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 HM13Q8TCT9 377 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 GLMNQ92990 594 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 PYCR2Q96C36 320 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 OTUB1Q96FW1 271 aaPredicted RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 CASD1Q96PB1 797 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 DGCR6LQ9BY27 220 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 RAD21L1Q9H4I0 556 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 NOL6Q9H6R4 1146 aaKnown RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 SGK2Q9HBY8 427 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 AIG1Q9NVV5 245 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 CORO2BQ9UQ03 480 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 SAMHD1Q9Y3Z3 626 aaKnown RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 ANKDD1BA6NHY2 528 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 CXCR6O00574 342 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 PER2O15055 1255 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 NBNO60934 754 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 FAM20BO75063 409 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 LATS1O95835 1130 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 ENO2P09104 434 aaPredicted RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 CBSLP0DN79 551 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 ARNTP27540 789 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 CBSP35520 551 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 MAPK9P45984 424 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 ASMTP46597 345 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 PGFP49763 221 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 PTPN5P54829 565 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 AP1S2P56377 157 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 NFKB2Q00653 900 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 TUBB3Q13509 450 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 TLR1Q15399 786 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 NADK2Q4G0N4 442 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 SLC8B1Q6J4K2 584 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 NANOGP8Q6NSW7 305 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 ERICH5Q6P6B1 374 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 HIPK1Q86Z02 1210 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 PIANPQ8IYJ0 282 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 OFCC1Q8IZS5 231 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 KRT78Q8N1N4 520 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 UTP15Q8TED0 518 aaKnown RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 GATA6Q92908 595 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 SLC45A3Q96JT2 553 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 PLEKHG4BQ96PX9 1271 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 RBM4BQ9BQ04 359 aaKnown RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 CENPOQ9BU64 300 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 RBM4Q9BWF3 364 aaKnown RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 SLC29A3Q9BZD2 475 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 NANOGQ9H9S0 305 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 SDR39U1Q9NRG7 319 aaPredicted RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 CCM2LQ9NUG4 571 aaPredicted RBP6.44□□□□□ -1.38
BDNF-203ENST00000395978 PTTG2Q9NZH5 202 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 IL17CQ9P0M4 197 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 PCDHGA7Q9Y5G6 932 aa6.44□□□□□ -1.38
BDNF-203ENST00000395978 IGLV3-10A0A075B6K4 115 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 PDZK1P1A8MUH7 402 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 K7ERQ8 282 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 TLL1O43897 1013 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 CACNG3O60359 315 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 ADH1CP00326 375 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 EBLN1P0CF75 366 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 CDH1P12830 882 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 S100A5P33763 92 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 GGT5P36269 586 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 HNMTP50135 292 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 SRSF11Q05519 484 aaKnown RBP6.43□□□□□ -1.38
BDNF-203ENST00000395978 CBLBQ13191 982 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 ZNF697Q5TEC3 545 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 KANK2Q63ZY3 851 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 LRRC66Q68CR7 880 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 GDPD4Q6W3E5 623 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 LARP4Q71RC2 724 aaKnown RBP eCLIP6.43□□□□□ -1.38
BDNF-203ENST00000395978 ARHGAP22Q7Z5H3 698 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 R3HCC1LQ7Z5L2 792 aaKnown RBP6.43□□□□□ -1.38
BDNF-203ENST00000395978 KBTBD2Q8IY47 623 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 CXorf40AQ8TE69 158 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 OR8D1Q8WZ84 308 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 QRFPRQ96P65 431 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 CD244Q9BZW8 370 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 EXOSC4Q9NPD3 245 aaKnown RBP6.43□□□□□ -1.38
BDNF-203ENST00000395978 DEC1Q9P2X7 70 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 DNAJB9Q9UBS3 223 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 ASF1AQ9Y294 204 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 PCDHGA11Q9Y5H2 935 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 GMPPBQ9Y5P6 360 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 OAS3Q9Y6K5 1087 aaKnown RBP6.43□□□□□ -1.38
BDNF-203ENST00000395978 C1QTNF3-AMACRE9PGA6 284 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 MANBAO00462 879 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 PPP6CO00743 305 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 DENRO43583 198 aaKnown RBP6.43□□□□□ -1.38
BDNF-203ENST00000395978 MATN4O95460 622 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 CXCR2P25025 360 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 HOXD9P28356 352 aaPredicted RBP6.43□□□□□ -1.38
BDNF-203ENST00000395978 HNF1BP35680 557 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 ATP6V1E1P36543 226 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 RGRP47804 291 aa6.43□□□□□ -1.38
BDNF-203ENST00000395978 CDKN1CP49918 316 aaPredicted RBP6.43□□□□□ -1.38
BDNF-203ENST00000395978 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
BDNF-203ENST00000395978 ZNF140P52738 457 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms