RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 FEM1CQ96JP0 617 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 C18orf12Q96KH6 178 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 SPATA5L1Q9BVQ7 753 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 TXLNGYQ9BZA5 131 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 XPO4Q9C0E2 1151 aaKnown RBP5.42□□□□□ -1.54
AP3S1-202ENST00000395548 CDT1Q9H211 546 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 CHMP4BQ9H444 224 aaKnown RBP5.42□□□□□ -1.54
AP3S1-202ENST00000395548 PRDM13Q9H4Q3 707 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 SARS2Q9NP81 518 aaKnown RBP5.42□□□□□ -1.54
AP3S1-202ENST00000395548 PNPOQ9NVS9 261 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 SUN2Q9UH99 717 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 LSM7Q9UK45 103 aaKnown RBP5.42□□□□□ -1.54
AP3S1-202ENST00000395548 COL27A1Q8IZC6 1860 aaPredicted RBP5.42□□□□□ -1.54
AP3S1-202ENST00000395548 ABCA4P78363 2273 aa5.42□□□□□ -1.54
AP3S1-202ENST00000395548 POLEQ07864 2286 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 PRRC2AP48634 2157 aaKnown RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3DA0A087WVF3 549 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3IA0A087WXS9 549 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3EA0A087X179 549 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3KA0A087X1G2 549 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3FA6NER0 549 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ZSCAN5CA6NGD5 496 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 HMX3A6NHT5 357 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 CCDC69A6NI79 296 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TTC36A6NLP5 189 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3LB9A6J9 549 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 CYB561D2O14569 222 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 KCNAB3O43448 404 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 NEBLO76041 1014 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3HP0C7X1 549 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ATP6V1B1P15313 513 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ANXA13P27216 316 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 PCSK6P29122 969 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 GNA11P29992 359 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 MAGEA11P43364 429 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 NAMPTP43490 491 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 PTH2RP49190 550 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 IST1P53990 364 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 CACNA2D1P54289 1103 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 MFAP3P55082 362 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 NLRP5P59047 1200 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ZFP36L1Q07352 338 aaKnown RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 GOLGA8FQ08AF8 430 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ZNF844Q08AG5 666 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 GOLGA8DPQ0D2H9 430 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 SLC12A1Q13621 1099 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 RAB39AQ14964 217 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 SETMARQ53H47 684 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3GQ6DHY5 549 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3CQ6IPX1 549 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ACAD10Q6JQN1 1059 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 KLHL17Q6TDP4 642 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TMTC3Q6ZXV5 915 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 GALNTL5Q7Z4T8 443 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 CLNKQ7Z7G1 428 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 SPATA2LQ8IUW3 424 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 APLFQ8IW19 511 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 CEP97Q8IW35 865 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 CCDC117Q8IWD4 279 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TBC1D3Q8IZP1 549 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 AOPEPQ8N6M6 819 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 Q8NA96 180 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 FAM98AQ8NCA5 519 aaKnown RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ZNF548Q8NEK5 533 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 IL17RDQ8NFM7 739 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 OR6C4Q8NGE1 309 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 C19orf60Q96EN9 201 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 PDLIM2Q96JY6 352 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 SLC25A23Q9BV35 468 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 PACSIN1Q9BY11 444 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 AGXT2Q9BYV1 514 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 DCLK3Q9C098 648 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 NEUROG2Q9H2A3 272 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 CXorf56Q9H5V9 222 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 GRPEL1Q9HAV7 217 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 SEPSECSQ9HD40 501 aaKnown RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 MRPL40Q9NQ50 206 aaKnown RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 PRSS16Q9NQE7 514 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ABCF3Q9NUQ8 709 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 ASF1BQ9NVP2 202 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 WRAP73Q9P2S5 460 aaPredicted RBP5.41□□□□□ -1.54
AP3S1-202ENST00000395548 SLC17A6Q9P2U8 582 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 OSGIN2Q9Y236 505 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 PCDHA3Q9Y5H8 950 aa5.41□□□□□ -1.54
AP3S1-202ENST00000395548 TRIP11Q15643 1979 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 CKAP5Q14008 2032 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 ANK2Q01484 3957 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 DOCK9Q9BZ29 2069 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 A0A1W2PS29 197 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 LRRC14BA6NHZ5 514 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 C10orf142B7Z368 130 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 K7ERI5 159 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 AQP9O43315 295 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 SPRY1O43609 319 aaPredicted RBP5.4□□□□□ -1.54
AP3S1-202ENST00000395548 KRT86O43790 486 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 TMEM63AO94886 807 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 TNFRSF6BO95407 300 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 ANXA2P07355 339 aaKnown RBP5.4□□□□□ -1.54
AP3S1-202ENST00000395548 ITGA5P08648 1049 aa5.4□□□□□ -1.54
AP3S1-202ENST00000395548 GOT1P17174 413 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms