RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TBRG1Q3YBR2 411 aa18.56■□□□□ 0.56
HOXC6-202ENST00000394331 EDEM1Q92611 657 aa18.56■□□□□ 0.56
HOXC6-202ENST00000394331 PHOX2BQ99453 314 aa18.56■□□□□ 0.56
HOXC6-202ENST00000394331 TTYH2Q9BSA4 534 aa18.56■□□□□ 0.56
HOXC6-202ENST00000394331 FAM105AQ9NUU6 356 aa18.56■□□□□ 0.56
HOXC6-202ENST00000394331 SCN3BQ9NY72 215 aa18.56■□□□□ 0.56
HOXC6-202ENST00000394331 MAGED1Q9Y5V3 778 aaPredicted RBP18.56■□□□□ 0.56
HOXC6-202ENST00000394331 OR2A25A4D2G3 310 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 CTDSP2O14595 271 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 FGF4P08620 206 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 GSTM1P09488 218 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 HOXC8P31273 242 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 NXNL2Q5VZ03 156 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 CYP20A1Q6UW02 462 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 RAB43Q86YS6 212 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 SYTL1Q8IYJ3 562 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 ZFAND1Q8TCF1 268 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 TRAF4Q9BUZ4 470 aaPredicted RBP18.55■□□□□ 0.56
HOXC6-202ENST00000394331 REXO4Q9GZR2 422 aaKnown RBP18.55■□□□□ 0.56
HOXC6-202ENST00000394331 SMURF2Q9HAU4 748 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 CSNK1G1Q9HCP0 422 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 TMEM30AQ9NV96 361 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 TMEM45AQ9NWC5 275 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 ERVW-1Q9UQF0 538 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 BTBD3Q9Y2F9 522 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 AAR2Q9Y312 384 aaKnown RBP18.55■□□□□ 0.56
HOXC6-202ENST00000394331 PCDHGB2Q9Y5G2 931 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 NEMP2A6NFY4 417 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 UBFD1O14562 309 aaKnown RBP18.55■□□□□ 0.56
HOXC6-202ENST00000394331 PDPK1O15530 556 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 RBP1P09455 135 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 TPH1P17752 444 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 BDNFP23560 247 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 CYP2C18P33260 490 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 PTGS2P35354 604 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 MAGEA11P43364 429 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 BEX3Q00994 111 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 POU4F1Q01851 419 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 GLYATQ6IB77 296 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 BHLHA9Q7RTU4 235 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 FBXL6Q8N531 539 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 DNAJB14Q8TBM8 379 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 FCGR1BQ92637 280 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 RPL3LQ92901 407 aaKnown RBP18.55■□□□□ 0.56
HOXC6-202ENST00000394331 RNF34Q969K3 372 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 PDLIM5Q96HC4 596 aaKnown RBP18.55■□□□□ 0.56
HOXC6-202ENST00000394331 RPL10LQ96L21 214 aaKnown RBP18.55■□□□□ 0.56
HOXC6-202ENST00000394331 TSGA13Q96PP4 275 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 TRIM62Q9BVG3 475 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 C6orf62Q9GZU0 229 aaPredicted RBP18.55■□□□□ 0.56
HOXC6-202ENST00000394331 CACNG4Q9UBN1 327 aa18.55■□□□□ 0.56
HOXC6-202ENST00000394331 XPNPEP2O43895 674 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 ZNF780AO75290 641 aaPredicted RBP18.54■□□□□ 0.56
HOXC6-202ENST00000394331 GOT2P00505 430 aaKnown RBP18.54■□□□□ 0.56
HOXC6-202ENST00000394331 CYP11A1P05108 521 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 RPL9P32969 192 aaKnown RBP18.54■□□□□ 0.56
HOXC6-202ENST00000394331 TRAF7Q6Q0C0 670 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 PLCZ1Q86YW0 608 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 MFSD6LQ8IWD5 586 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 KLHDC8BQ8IXV7 354 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 BLOC1S5Q8TDH9 187 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 ISG20Q96AZ6 181 aaKnown RBP18.54■□□□□ 0.56
HOXC6-202ENST00000394331 CITED4Q96RK1 184 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 PTPN18Q99952 460 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 NARFLQ9H6Q4 476 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 COMMD8Q9NX08 183 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 ATP6AP2A0A1C7CYW4 349 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 MEIS3P2A8K0S8 358 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 VPS4BO75351 444 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 ATP6AP2O75787 350 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 KCNA5P22460 613 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 NMBRP28336 390 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 ERP29P30040 261 aaKnown RBP18.54■□□□□ 0.56
HOXC6-202ENST00000394331 CLK1P49759 484 aaKnown RBP18.54■□□□□ 0.56
HOXC6-202ENST00000394331 FKBP1BP68106 108 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 NDUFAF5Q5TEU4 345 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 AGAP9Q5VTM2 703 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 FAM122CQ6P4D5 195 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 B3GNT8Q7Z7M8 397 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 ITFG1Q8TB96 612 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 CDADC1Q9BWV3 514 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 SLC7A5P2Q9GIP4 190 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 LEF1Q9UJU2 399 aaPredicted RBP18.54■□□□□ 0.56
HOXC6-202ENST00000394331 SNX10Q9Y5X0 201 aa18.54■□□□□ 0.56
HOXC6-202ENST00000394331 BCKDKO14874 412 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 RGS10O43665 173 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CACNG3O60359 315 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 ANXA6P08133 673 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 SLC15A1P46059 708 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 MRPS6P82932 125 aaKnown RBP18.53■□□□□ 0.56
HOXC6-202ENST00000394331 ZNF460Q14592 562 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 PCSK7Q16549 785 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 LRRC26Q2I0M4 334 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 SPRYD7Q5W111 196 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 FAM205BPQ63HN1 556 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CLEC6AQ6EIG7 209 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 LTB4R2Q9NPC1 389 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CHST12Q9NRB3 414 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 UBP1Q9NZI7 540 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 FLRT1Q9NZU1 646 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms