RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PEX13Q92968 403 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 STAMBPL1Q96FJ0 436 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ELMO2Q96JJ3 720 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 SIGLEC10Q96LC7 697 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 C9orf72Q96LT7 481 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 WDR83Q9BRX9 315 aaKnown RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 KIR3DX1Q9H7L2 352 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 CPNE5Q9HCH3 593 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 FBXO6Q9NRD1 293 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 HRASLS2Q9NWW9 162 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 SLC39A1Q9NY26 324 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 PDP2Q9P2J9 529 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 SLC17A6Q9P2U8 582 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 GALPQ9UBC7 116 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 CDYLQ9Y232 598 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 CRYL1Q9Y2S2 319 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 SNX24Q9Y343 169 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 B3GALT1Q9Y5Z6 326 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 LOC400499M0QZD8 3231 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ARHGEF17Q96PE2 2063 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZFC3H1O60293 1989 aaKnown RBP7.46□□□□□ -1.21
HMGB3P1-201ENST00000393368 IGHV5-51A0A0C4DH38 117 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TEX51A0A1B0GUA7 166 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 FAM237BA0A1B0GVD1 139 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 GSAPA4D1B5 854 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 CCDC188H7C350 402 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 IFRD1O00458 451 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 BTN3A3O00478 584 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 PRMT5O14744 637 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 LIN7AO14910 233 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TP73O15350 636 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 RRP8O43159 456 aaKnown RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 RAD51CO43502 376 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 C9P02748 559 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TPBGLP0DKB5 382 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 PAMP19021 973 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 ACADLP28330 430 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 SLC1A2P43004 574 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 ABCG1P45844 678 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 RPL21P46778 160 aaKnown RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 ITGA8P53708 1063 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TLE3Q04726 772 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 FOXM1Q08050 763 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 ABRQ12979 859 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 CLN3Q13286 438 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 CTBP1Q13363 440 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TRA2AQ13595 282 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 CRYMQ14894 314 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TYSND1Q2T9J0 566 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 HSP90AA5PQ58FG0 334 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 DNTTIP2Q5QJE6 756 aaKnown RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 CACHD1Q5VU97 1274 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 MRNIPQ6NTE8 343 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 NEPROQ6NW34 567 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 LRRC69Q6ZNQ3 347 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TMEM135Q86UB9 458 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 VASH2Q86V25 355 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 CILP2Q8IUL8 1156 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 SPATA4Q8NEY3 305 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 LCN9Q8WX39 176 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TFGQ92734 400 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TMEM159Q96B96 161 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 CFAP36Q96G28 342 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 SGSM3Q96HU1 749 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 BIRC8Q96P09 236 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TTC1Q99614 292 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 MAP3K3Q99759 626 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 DPYSL5Q9BPU6 564 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 KLHL25Q9H0H3 589 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 DPH5Q9H2P9 285 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 EPB41L1Q9H4G0 881 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 PLAC1Q9HBJ0 212 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 IARS2Q9NSE4 1012 aaKnown RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 C20orf96Q9NUD7 363 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 SIDT1Q9NXL6 827 aaKnown RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 AKAP7Q9P0M2 348 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 GNPTGQ9UJJ9 305 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 LHX6Q9UPM6 363 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 ICKQ9UPZ9 632 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 CHMP2BQ9UQN3 213 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 ASF1AQ9Y294 204 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 TDRKHQ9Y2W6 561 aaKnown RBP7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 PCDHGA7Q9Y5G6 932 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 COLEC10Q9Y6Z7 277 aa7.46□□□□□ -1.22
HMGB3P1-201ENST00000393368 PKD1L2Q7Z442 2459 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 APC2O95996 2303 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SMG1Q96Q15 3661 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 KLHL33A6NCF5 533 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 EFCAB8A8MWE9 144 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 B4E171 279 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 QSOX1O00391 747 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 BTN3A1O00481 513 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 NVLO15381 856 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 USP1O94782 785 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 SEC31AO94979 1220 aaKnown RBP7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 S1PR4O95977 384 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ANKRD34CP0C6C1 535 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 EBLN1P0CF75 366 aa7.45□□□□□ -1.22
HMGB3P1-201ENST00000393368 ERVK-10P10266 1014 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms